Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Mir697-201ENSMUST00000102316 109 ntBASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Gm13357-201ENSMUST00000120528 537 ntBASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Gm9027-201ENSMUST00000165914 661 ntBASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Gm37328-201ENSMUST00000193191 640 ntBASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Cma2-202ENSMUST00000228263 857 ntBASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Mir296-201ENSMUST00000083587 79 ntBASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Mpdz-201ENSMUST00000102830 7512 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col16a1Q8BLX7 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Gm26967-201ENSMUST00000182878 2303 ntBASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Gm14865-201ENSMUST00000117523 494 ntBASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Gm11920-201ENSMUST00000118491 563 ntBASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Gm13224-201ENSMUST00000119586 94 ntBASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Gm15311-201ENSMUST00000119682 282 ntBASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Gm15305-201ENSMUST00000120354 288 ntBASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Gm14925-201ENSMUST00000120611 438 ntBASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Gm6451-201ENSMUST00000121488 717 ntBASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Gm16027-201ENSMUST00000161618 758 ntBASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Mir7072-201ENSMUST00000184542 60 ntBASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Gm17895-201ENSMUST00000194028 874 ntBASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 CT009713.5-201ENSMUST00000224508 909 ntBASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 AC154324.1-201ENSMUST00000226711 814 ntBASIC9.46□□□□□ -0.9
Col16a1Q8BLX7 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 AC117608.1-201ENSMUST00000225500 3418 ntBASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Cep83os-201ENSMUST00000181906 6566 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Rai14-201ENSMUST00000090339 4909 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Gm22267-201ENSMUST00000104008 131 ntBASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 n-R5s178-201ENSMUST00000104249 114 ntBASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Gm11462-201ENSMUST00000117749 562 ntBASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Gm14466-201ENSMUST00000119028 451 ntBASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Gm26169-201ENSMUST00000158420 135 ntBASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 AL591207.2-201ENSMUST00000222991 337 ntBASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Gm16020-201ENSMUST00000084281 210 ntBASIC9.45□□□□□ -0.9
Col16a1Q8BLX7 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col16a1Q8BLX7 Tmem161b-206ENSMUST00000225069 2414 ntBASIC9.44□□□□□ -0.9
Col16a1Q8BLX7 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col16a1Q8BLX7 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Col16a1Q8BLX7 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col16a1Q8BLX7 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Col16a1Q8BLX7 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC9.44□□□□□ -0.9
Col16a1Q8BLX7 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col16a1Q8BLX7 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Col16a1Q8BLX7 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC9.44□□□□□ -0.9
Col16a1Q8BLX7 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms