Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm12565-201ENSMUST00000119004 649 ntBASIC6.31□□□□□ -1.4
Rif1Q6PR54 Gm14018-201ENSMUST00000119042 455 ntBASIC6.31□□□□□ -1.4
Rif1Q6PR54 Gm12307-201ENSMUST00000120581 590 ntBASIC6.31□□□□□ -1.4
Rif1Q6PR54 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.31□□□□□ -1.4
Rif1Q6PR54 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rif1Q6PR54 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rif1Q6PR54 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rif1Q6PR54 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rif1Q6PR54 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC6.31□□□□□ -1.4
Rif1Q6PR54 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rif1Q6PR54 Gm28581-201ENSMUST00000186086 2177 ntBASIC6.31□□□□□ -1.4
Rif1Q6PR54 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC6.31□□□□□ -1.4
Rif1Q6PR54 Enox2-203ENSMUST00000114912 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rif1Q6PR54 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Rif1Q6PR54 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rif1Q6PR54 Gm16497-201ENSMUST00000222024 2842 ntTSL 2 BASIC6.31□□□□□ -1.4
Rif1Q6PR54 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC6.31□□□□□ -1.4
Rif1Q6PR54 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rif1Q6PR54 Asns-201ENSMUST00000031766 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rif1Q6PR54 Gm38359-201ENSMUST00000191884 2225 ntBASIC6.31□□□□□ -1.4
Rif1Q6PR54 Ldb2-207ENSMUST00000199534 2541 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rif1Q6PR54 Zfp866-201ENSMUST00000131784 2680 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rif1Q6PR54 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rif1Q6PR54 AC123619.1-203ENSMUST00000225276 2757 ntBASIC6.31□□□□□ -1.4
Rif1Q6PR54 Orc1-201ENSMUST00000102744 3014 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm26289-201ENSMUST00000104169 131 ntBASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rif1Q6PR54 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm27512-201ENSMUST00000175328 126 ntBASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm27460-201ENSMUST00000184213 100 ntBASIC6.3□□□□□ -1.4
Rif1Q6PR54 Mir6241-201ENSMUST00000184225 103 ntBASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm5261-201ENSMUST00000185860 713 ntBASIC6.3□□□□□ -1.4
Rif1Q6PR54 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm43711-201ENSMUST00000195994 373 ntBASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Mir296-201ENSMUST00000083587 79 ntBASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm44834-201ENSMUST00000206671 1396 ntBASIC6.3□□□□□ -1.4
Rif1Q6PR54 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Ttc16-201ENSMUST00000066478 2979 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm43621-201ENSMUST00000202733 2022 ntBASIC6.3□□□□□ -1.4
Rif1Q6PR54 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC6.3□□□□□ -1.4
Rif1Q6PR54 AW822252-205ENSMUST00000192662 1352 ntBASIC6.3□□□□□ -1.4
Rif1Q6PR54 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm11922-201ENSMUST00000118967 475 ntBASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm14824-201ENSMUST00000119421 737 ntBASIC6.3□□□□□ -1.4
Rif1Q6PR54 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm5973-201ENSMUST00000178542 496 ntBASIC6.3□□□□□ -1.4
Rif1Q6PR54 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm7867-201ENSMUST00000189856 546 ntBASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm19088-201ENSMUST00000198800 566 ntBASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC6.3□□□□□ -1.4
Rif1Q6PR54 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC6.3□□□□□ -1.4
Rif1Q6PR54 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Ikbke-201ENSMUST00000062108 3251 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Gm12002-202ENSMUST00000153794 1803 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Trak2-205ENSMUST00000174120 2636 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Rif1Q6PR54 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Rif1Q6PR54 Ldb2-201ENSMUST00000070748 2418 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rif1Q6PR54 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rif1Q6PR54 Slc1a7-201ENSMUST00000106713 3007 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rif1Q6PR54 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Rif1Q6PR54 Gm11850-201ENSMUST00000119679 479 ntBASIC6.29□□□□□ -1.4
Rif1Q6PR54 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC6.29□□□□□ -1.4
Rif1Q6PR54 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rif1Q6PR54 U2af1l4-205ENSMUST00000163482 668 ntTSL 5 BASIC6.29□□□□□ -1.4
Rif1Q6PR54 Gm9142-201ENSMUST00000187161 955 ntBASIC6.29□□□□□ -1.4
Rif1Q6PR54 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC6.29□□□□□ -1.4
Rif1Q6PR54 Gm43392-201ENSMUST00000196560 434 ntBASIC6.29□□□□□ -1.4
Rif1Q6PR54 Gm7492-201ENSMUST00000201745 725 ntBASIC6.29□□□□□ -1.4
Rif1Q6PR54 Gm18012-201ENSMUST00000204558 773 ntBASIC6.29□□□□□ -1.4
Rif1Q6PR54 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC6.29□□□□□ -1.4
Rif1Q6PR54 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC6.29□□□□□ -1.4
Rif1Q6PR54 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rif1Q6PR54 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rif1Q6PR54 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rif1Q6PR54 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rif1Q6PR54 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Rif1Q6PR54 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Rif1Q6PR54 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Rif1Q6PR54 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rif1Q6PR54 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rif1Q6PR54 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Rif1Q6PR54 AC155298.3-201ENSMUST00000225307 3220 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms