Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC6.7□□□□□ -1.34
Col8a1Q00780 Gm18416-201ENSMUST00000175635 1003 ntBASIC6.7□□□□□ -1.34
Col8a1Q00780 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC6.7□□□□□ -1.34
Col8a1Q00780 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.7□□□□□ -1.34
Col8a1Q00780 Mir3473g-201ENSMUST00000183494 136 ntBASIC6.7□□□□□ -1.34
Col8a1Q00780 Gm27435-201ENSMUST00000183588 88 ntBASIC6.7□□□□□ -1.34
Col8a1Q00780 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.7□□□□□ -1.34
Col8a1Q00780 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.7□□□□□ -1.34
Col8a1Q00780 Gm44869-201ENSMUST00000208836 357 ntBASIC6.7□□□□□ -1.34
Col8a1Q00780 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.7□□□□□ -1.34
Col8a1Q00780 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.7□□□□□ -1.34
Col8a1Q00780 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.7□□□□□ -1.34
Col8a1Q00780 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.7□□□□□ -1.34
Col8a1Q00780 AC154747.1-201ENSMUST00000225265 239 ntBASIC6.7□□□□□ -1.34
Col8a1Q00780 AC161537.1-202ENSMUST00000228450 868 ntBASIC6.7□□□□□ -1.34
Col8a1Q00780 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col8a1Q00780 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col8a1Q00780 Gm24035-201ENSMUST00000082867 107 ntBASIC6.7□□□□□ -1.34
Col8a1Q00780 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col8a1Q00780 Drp2-204ENSMUST00000113228 3141 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col8a1Q00780 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col8a1Q00780 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col8a1Q00780 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Col8a1Q00780 Pygl-202ENSMUST00000161083 2992 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col8a1Q00780 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC6.7□□□□□ -1.34
Col8a1Q00780 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col8a1Q00780 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Nudt13-201ENSMUST00000022343 2494 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Olfr545-202ENSMUST00000216116 3496 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Col8a1Q00780 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Col8a1Q00780 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC6.69□□□□□ -1.34
Col8a1Q00780 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC6.69□□□□□ -1.34
Col8a1Q00780 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Tmem268-202ENSMUST00000080336 3630 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Hnf4g-201ENSMUST00000108393 2224 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm43071-201ENSMUST00000197233 2032 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm17359-203ENSMUST00000199658 1819 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Col8a1Q00780 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col8a1Q00780 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Arpp21-201ENSMUST00000035085 3254 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm15925-201ENSMUST00000120641 1881 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Fbxo9-201ENSMUST00000001402 1850 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm43420-201ENSMUST00000198012 1857 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Eri2-207ENSMUST00000150844 3564 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm25631-201ENSMUST00000104390 130 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Cd68-202ENSMUST00000108654 1008 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm13731-201ENSMUST00000117332 196 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm12098-201ENSMUST00000118277 508 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm13521-201ENSMUST00000118922 866 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm13626-201ENSMUST00000119435 402 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm14186-201ENSMUST00000120804 137 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm15780-201ENSMUST00000121283 935 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.69□□□□□ -1.34
Col8a1Q00780 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Mir7082-201ENSMUST00000183526 92 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm37669-201ENSMUST00000192184 820 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm19066-201ENSMUST00000193232 1078 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm8023-201ENSMUST00000195298 903 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm44395-201ENSMUST00000197056 153 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Col8a1Q00780 Igkv4-77-201ENSMUST00000199410 352 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm8479-201ENSMUST00000203825 718 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms