Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC7.96□□□□□ -1.14
CiitaP79621 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CiitaP79621 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
CiitaP79621 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CiitaP79621 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
CiitaP79621 Gm44950-201ENSMUST00000206403 2296 ntBASIC7.96□□□□□ -1.14
CiitaP79621 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CiitaP79621 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC7.96□□□□□ -1.14
CiitaP79621 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CiitaP79621 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC7.96□□□□□ -1.14
CiitaP79621 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CiitaP79621 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CiitaP79621 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC7.96□□□□□ -1.14
CiitaP79621 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CiitaP79621 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CiitaP79621 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC7.95□□□□□ -1.14
CiitaP79621 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC7.95□□□□□ -1.14
CiitaP79621 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
CiitaP79621 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CiitaP79621 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
CiitaP79621 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CiitaP79621 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CiitaP79621 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC7.95□□□□□ -1.14
CiitaP79621 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
CiitaP79621 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
CiitaP79621 Gm14904-201ENSMUST00000117067 335 ntBASIC7.95□□□□□ -1.14
CiitaP79621 Gm15203-201ENSMUST00000117668 455 ntBASIC7.95□□□□□ -1.14
CiitaP79621 Gm13486-201ENSMUST00000119910 282 ntBASIC7.95□□□□□ -1.14
CiitaP79621 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CiitaP79621 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CiitaP79621 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CiitaP79621 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CiitaP79621 Gm27866-201ENSMUST00000184459 171 ntBASIC7.95□□□□□ -1.14
CiitaP79621 Gm8502-201ENSMUST00000185708 901 ntBASIC7.95□□□□□ -1.14
CiitaP79621 Gm21147-201ENSMUST00000186046 913 ntBASIC7.95□□□□□ -1.14
CiitaP79621 Gm29354-201ENSMUST00000187613 696 ntBASIC7.95□□□□□ -1.14
CiitaP79621 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC7.95□□□□□ -1.14
CiitaP79621 Gm37295-201ENSMUST00000192186 109 ntBASIC7.95□□□□□ -1.14
CiitaP79621 Gm19211-201ENSMUST00000200251 1206 ntBASIC7.95□□□□□ -1.14
CiitaP79621 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CiitaP79621 Gm43905-201ENSMUST00000204516 204 ntBASIC7.95□□□□□ -1.14
CiitaP79621 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CiitaP79621 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC7.95□□□□□ -1.14
CiitaP79621 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC7.95□□□□□ -1.14
CiitaP79621 Gm45725-201ENSMUST00000212962 337 ntBASIC7.95□□□□□ -1.14
CiitaP79621 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC7.95□□□□□ -1.14
CiitaP79621 AL591207.2-201ENSMUST00000222991 337 ntBASIC7.95□□□□□ -1.14
CiitaP79621 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
CiitaP79621 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
CiitaP79621 Gm37283-201ENSMUST00000193111 1571 ntBASIC7.95□□□□□ -1.14
CiitaP79621 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CiitaP79621 AC166574.1-201ENSMUST00000226916 1309 ntBASIC7.95□□□□□ -1.14
CiitaP79621 Gm29761-201ENSMUST00000215964 1939 ntBASIC7.95□□□□□ -1.14
CiitaP79621 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CiitaP79621 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
CiitaP79621 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
CiitaP79621 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CiitaP79621 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC7.95□□□□□ -1.14
CiitaP79621 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CiitaP79621 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
CiitaP79621 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CiitaP79621 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CiitaP79621 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
CiitaP79621 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 Gm44769-201ENSMUST00000206120 2809 ntBASIC7.94□□□□□ -1.14
CiitaP79621 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
CiitaP79621 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 Gm15739-201ENSMUST00000118049 872 ntBASIC7.94□□□□□ -1.14
CiitaP79621 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
CiitaP79621 Gm8421-201ENSMUST00000119439 305 ntBASIC7.94□□□□□ -1.14
CiitaP79621 Gm11726-201ENSMUST00000121028 424 ntBASIC7.94□□□□□ -1.14
CiitaP79621 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC7.94□□□□□ -1.14
CiitaP79621 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC7.94□□□□□ -1.14
CiitaP79621 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC7.94□□□□□ -1.14
CiitaP79621 Gm25505-201ENSMUST00000157220 246 ntBASIC7.94□□□□□ -1.14
CiitaP79621 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 Gm5787-201ENSMUST00000183049 1038 ntBASIC7.94□□□□□ -1.14
CiitaP79621 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC7.94□□□□□ -1.14
CiitaP79621 Gm22711-202ENSMUST00000197029 135 ntBASIC7.94□□□□□ -1.14
CiitaP79621 Gm44147-201ENSMUST00000204658 94 ntBASIC7.94□□□□□ -1.14
CiitaP79621 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 AC131117.2-202ENSMUST00000224539 547 ntBASIC7.94□□□□□ -1.14
CiitaP79621 CT009556.4-201ENSMUST00000227092 200 ntBASIC7.94□□□□□ -1.14
CiitaP79621 n-R5s29-201ENSMUST00000082836 119 ntBASIC7.94□□□□□ -1.14
CiitaP79621 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
CiitaP79621 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
CiitaP79621 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CiitaP79621 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
CiitaP79621 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms