Protein–RNA interactions for Protein: P55194

Sh3bp1, SH3 domain-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3bp1P55194 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sh3bp1P55194 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sh3bp1P55194 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Sh3bp1P55194 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Sh3bp1P55194 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Sh3bp1P55194 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 AC164437.5-201ENSMUST00000227235 4414 ntBASIC8.24□□□□□ -1.09
Sh3bp1P55194 Gm38262-201ENSMUST00000194760 1382 ntBASIC8.24□□□□□ -1.09
Sh3bp1P55194 AC122769.3-201ENSMUST00000227739 3245 ntBASIC8.24□□□□□ -1.09
Sh3bp1P55194 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Gm11907-201ENSMUST00000118918 1007 ntBASIC8.24□□□□□ -1.09
Sh3bp1P55194 Gm12959-201ENSMUST00000119396 403 ntBASIC8.24□□□□□ -1.09
Sh3bp1P55194 Gm15049-201ENSMUST00000120474 463 ntBASIC8.24□□□□□ -1.09
Sh3bp1P55194 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Gm22424-201ENSMUST00000158527 87 ntBASIC8.24□□□□□ -1.09
Sh3bp1P55194 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Mir3471-2-201ENSMUST00000174896 102 ntBASIC8.24□□□□□ -1.09
Sh3bp1P55194 Gm22690-201ENSMUST00000175054 110 ntBASIC8.24□□□□□ -1.09
Sh3bp1P55194 Gm27006-201ENSMUST00000182218 943 ntBASIC8.24□□□□□ -1.09
Sh3bp1P55194 Gm18033-201ENSMUST00000186678 550 ntBASIC8.24□□□□□ -1.09
Sh3bp1P55194 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Gm43008-201ENSMUST00000202346 286 ntBASIC8.24□□□□□ -1.09
Sh3bp1P55194 Olfr471-201ENSMUST00000210091 936 ntBASIC8.24□□□□□ -1.09
Sh3bp1P55194 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC8.24□□□□□ -1.09
Sh3bp1P55194 CT030170.6-202ENSMUST00000223186 544 ntBASIC8.24□□□□□ -1.09
Sh3bp1P55194 AC140208.1-201ENSMUST00000226609 285 ntBASIC8.24□□□□□ -1.09
Sh3bp1P55194 Olfr120-201ENSMUST00000077498 993 ntBASIC8.24□□□□□ -1.09
Sh3bp1P55194 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
Sh3bp1P55194 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC8.24□□□□□ -1.09
Sh3bp1P55194 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC8.24□□□□□ -1.09
Sh3bp1P55194 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sh3bp1P55194 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sh3bp1P55194 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Gm38322-201ENSMUST00000194074 2300 ntBASIC8.23□□□□□ -1.09
Sh3bp1P55194 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Gm24071-201ENSMUST00000104520 132 ntBASIC8.23□□□□□ -1.09
Sh3bp1P55194 Gm11833-201ENSMUST00000118393 853 ntBASIC8.23□□□□□ -1.09
Sh3bp1P55194 Gm12677-201ENSMUST00000118668 426 ntBASIC8.23□□□□□ -1.09
Sh3bp1P55194 Gm13649-201ENSMUST00000122325 606 ntBASIC8.23□□□□□ -1.09
Sh3bp1P55194 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Gm25277-201ENSMUST00000157266 324 ntBASIC8.23□□□□□ -1.09
Sh3bp1P55194 Gm23117-201ENSMUST00000158482 108 ntBASIC8.23□□□□□ -1.09
Sh3bp1P55194 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC8.23□□□□□ -1.09
Sh3bp1P55194 Gm18709-201ENSMUST00000180564 489 ntBASIC8.23□□□□□ -1.09
Sh3bp1P55194 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Gm27617-201ENSMUST00000184321 168 ntBASIC8.23□□□□□ -1.09
Sh3bp1P55194 Gm8304-201ENSMUST00000185744 584 ntBASIC8.23□□□□□ -1.09
Sh3bp1P55194 Gm7560-201ENSMUST00000187748 873 ntBASIC8.23□□□□□ -1.09
Sh3bp1P55194 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Gm22149-202ENSMUST00000196259 137 ntBASIC8.23□□□□□ -1.09
Sh3bp1P55194 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Gm34701-201ENSMUST00000204213 849 ntBASIC8.23□□□□□ -1.09
Sh3bp1P55194 Gm33096-201ENSMUST00000210189 493 ntBASIC8.23□□□□□ -1.09
Sh3bp1P55194 AC154747.4-202ENSMUST00000223826 852 ntBASIC8.23□□□□□ -1.09
Sh3bp1P55194 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sh3bp1P55194 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms