Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
Sox3P53784 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC7.07□□□□□ -1.28
Sox3P53784 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Gm10259-201ENSMUST00000091289 1590 ntBASIC7.07□□□□□ -1.28
Sox3P53784 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Sox3P53784 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC7.07□□□□□ -1.28
Sox3P53784 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Sox3P53784 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Gm43398-201ENSMUST00000196584 2742 ntBASIC7.07□□□□□ -1.28
Sox3P53784 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC7.07□□□□□ -1.28
Sox3P53784 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Gm17137-201ENSMUST00000164106 4371 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox3P53784 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox3P53784 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox3P53784 AC140280.1-201ENSMUST00000227826 1847 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Sox3P53784 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Sox3P53784 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox3P53784 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sox3P53784 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Sox3P53784 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC7.06□□□□□ -1.28
Sox3P53784 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sox3P53784 Gm24195-201ENSMUST00000116804 137 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Gm13552-201ENSMUST00000118837 417 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Gm12174-201ENSMUST00000119853 813 ntBASIC7.06□□□□□ -1.28
Sox3P53784 n-R5s47-201ENSMUST00000122516 119 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC7.06□□□□□ -1.28
Sox3P53784 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC7.06□□□□□ -1.28
Sox3P53784 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sox3P53784 Gm22223-201ENSMUST00000157360 125 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Gm25342-201ENSMUST00000157459 122 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Sox3P53784 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC7.06□□□□□ -1.28
Sox3P53784 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Gm7481-201ENSMUST00000182020 995 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Gm29362-201ENSMUST00000187898 133 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC7.06□□□□□ -1.28
Sox3P53784 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sox3P53784 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC7.06□□□□□ -1.28
Sox3P53784 AC151967.1-201ENSMUST00000198146 76 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Gm8539-201ENSMUST00000199822 501 ntBASIC7.06□□□□□ -1.28
Sox3P53784 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sox3P53784 Gm3549-201ENSMUST00000203873 794 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Gm43926-201ENSMUST00000203978 430 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC7.06□□□□□ -1.28
Sox3P53784 CT010453.2-201ENSMUST00000227005 483 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Sox3P53784 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Sox3P53784 Gm25926-201ENSMUST00000082899 160 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
Sox3P53784 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Sox3P53784 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox3P53784 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox3P53784 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox3P53784 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
Sox3P53784 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Sox3P53784 Gm16204-201ENSMUST00000117864 1897 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox3P53784 Gm10623-201ENSMUST00000209081 2639 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sox3P53784 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox3P53784 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sox3P53784 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox3P53784 Gm37906-201ENSMUST00000192050 3035 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox3P53784 Gm43873-201ENSMUST00000204505 3938 ntBASIC7.06□□□□□ -1.28
Sox3P53784 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sox3P53784 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sox3P53784 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Sox3P53784 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Sox3P53784 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sox3P53784 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Sox3P53784 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sox3P53784 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Sox3P53784 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sox3P53784 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC7.05□□□□□ -1.28
Sox3P53784 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC7.05□□□□□ -1.28
Sox3P53784 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Sox3P53784 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
Sox3P53784 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sox3P53784 Gm13255-201ENSMUST00000117255 547 ntBASIC7.05□□□□□ -1.28
Sox3P53784 Gm15007-201ENSMUST00000119982 710 ntBASIC7.05□□□□□ -1.28
Sox3P53784 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC7.05□□□□□ -1.28
Sox3P53784 Gm22530-201ENSMUST00000158820 118 ntBASIC7.05□□□□□ -1.28
Sox3P53784 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sox3P53784 Gm10012-202ENSMUST00000170379 372 ntBASIC7.05□□□□□ -1.28
Sox3P53784 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC7.05□□□□□ -1.28
Sox3P53784 Gm5973-201ENSMUST00000178542 496 ntBASIC7.05□□□□□ -1.28
Sox3P53784 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Sox3P53784 Gm27178-201ENSMUST00000184962 340 ntBASIC7.05□□□□□ -1.28
Sox3P53784 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC7.05□□□□□ -1.28
Sox3P53784 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sox3P53784 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms