Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm42866-201ENSMUST00000195919 3304 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Shmt1P50431 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Shmt1P50431 Gm2108-201ENSMUST00000165058 2177 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shmt1P50431 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Shmt1P50431 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Shmt1P50431 Gm26945-201ENSMUST00000183191 2011 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Shmt1P50431 Gm37403-201ENSMUST00000193775 3521 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 AC155298.3-201ENSMUST00000225307 3220 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shmt1P50431 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Shmt1P50431 Gm13106-201ENSMUST00000119045 1443 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 Gm37234-201ENSMUST00000193259 1441 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC7.81□□□□□ -1.16
Shmt1P50431 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shmt1P50431 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shmt1P50431 Gm14891-201ENSMUST00000117378 596 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 Gm11320-201ENSMUST00000119434 463 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 Gm5255-201ENSMUST00000120125 642 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Shmt1P50431 Gm22795-201ENSMUST00000157233 118 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 Gm8582-201ENSMUST00000164061 789 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Shmt1P50431 Gm35108-201ENSMUST00000194321 699 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 Gm33191-201ENSMUST00000195604 699 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Shmt1P50431 Gm44892-201ENSMUST00000208595 488 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 Gm6667-201ENSMUST00000217169 564 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Shmt1P50431 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Shmt1P50431 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC7.81□□□□□ -1.16
Shmt1P50431 Mir138-2-201ENSMUST00000083578 71 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Shmt1P50431 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shmt1P50431 Gm45887-201ENSMUST00000212672 2998 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Shmt1P50431 Gm43618-201ENSMUST00000197392 3451 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 Gm18726-201ENSMUST00000218175 2010 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 Gm17137-201ENSMUST00000164106 4371 ntBASIC7.81□□□□□ -1.16
Shmt1P50431 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shmt1P50431 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shmt1P50431 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Shmt1P50431 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Shmt1P50431 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Shmt1P50431 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Shmt1P50431 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Shmt1P50431 Gm9575-201ENSMUST00000122140 1339 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 AC129208.1-201ENSMUST00000227474 2906 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Shmt1P50431 AC154522.1-201ENSMUST00000224647 1903 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Shmt1P50431 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC7.8□□□□□ -1.16
Shmt1P50431 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
Shmt1P50431 Klf5-202ENSMUST00000226784 2852 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Shmt1P50431 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Shmt1P50431 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Shmt1P50431 Gm14279-201ENSMUST00000117142 332 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Gm10243-201ENSMUST00000117571 333 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Gm13130-201ENSMUST00000119195 1166 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Gm11945-201ENSMUST00000120551 476 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Gm12400-201ENSMUST00000120915 1003 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Shmt1P50431 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Gm23077-201ENSMUST00000157854 116 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Shmt1P50431 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Shmt1P50431 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC7.8□□□□□ -1.16
Shmt1P50431 Gm23139-201ENSMUST00000179454 132 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Shmt1P50431 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
Shmt1P50431 Gm7341-201ENSMUST00000192183 926 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC7.8□□□□□ -1.16
Shmt1P50431 Gm44147-201ENSMUST00000204658 94 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC7.8□□□□□ -1.16
Shmt1P50431 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC7.8□□□□□ -1.16
Shmt1P50431 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Gm18562-201ENSMUST00000209949 915 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Shmt1P50431 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Shmt1P50431 AC131743.3-201ENSMUST00000222099 662 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC7.8□□□□□ -1.16
Shmt1P50431 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Shmt1P50431 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Shmt1P50431 Gm10247-201ENSMUST00000090395 333 ntBASIC7.8□□□□□ -1.16
Shmt1P50431 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Shmt1P50431 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Shmt1P50431 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Shmt1P50431 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Shmt1P50431 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC7.8□□□□□ -1.16
Shmt1P50431 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Shmt1P50431 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
Shmt1P50431 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms