Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 AC131654.1-201ENSMUST00000219675 745 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 Gm7727-201ENSMUST00000219830 671 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 AC124712.1-201ENSMUST00000221833 445 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sdc1P18828 Gm19238-201ENSMUST00000221936 1260 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 AC165157.2-201ENSMUST00000222265 367 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 Gm12691-202ENSMUST00000222516 918 ntTSL 5 BASIC5.82□□□□□ -1.48
Sdc1P18828 AC118249.1-201ENSMUST00000224822 608 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 AC156574.1-201ENSMUST00000227084 452 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sdc1P18828 Gm25129-201ENSMUST00000082651 133 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 Gm24924-201ENSMUST00000084007 164 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Sdc1P18828 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Sdc1P18828 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sdc1P18828 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sdc1P18828 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sdc1P18828 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sdc1P18828 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sdc1P18828 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Sdc1P18828 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sdc1P18828 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sdc1P18828 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sdc1P18828 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Sdc1P18828 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sdc1P18828 AC158605.3-201ENSMUST00000218999 2538 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sdc1P18828 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sdc1P18828 Gm44228-201ENSMUST00000204888 2026 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sdc1P18828 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sdc1P18828 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sdc1P18828 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sdc1P18828 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sdc1P18828 AC156163.1-201ENSMUST00000215598 3369 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Sdc1P18828 Gm13192-201ENSMUST00000101199 208 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Gm14682-201ENSMUST00000117977 524 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Gm16056-201ENSMUST00000119293 135 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Gm15369-201ENSMUST00000119681 394 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Gm13282-201ENSMUST00000121577 545 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Gm22275-201ENSMUST00000122470 310 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Tctex1d2-201ENSMUST00000014220 838 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sdc1P18828 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC5.81□□□□□ -1.48
Sdc1P18828 Gm14457-201ENSMUST00000148069 1161 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Scgb2b4-ps-201ENSMUST00000186705 340 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Gm7593-201ENSMUST00000187246 644 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Gm5696-201ENSMUST00000189850 552 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC5.81□□□□□ -1.48
Sdc1P18828 Gm29072-201ENSMUST00000191149 678 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Gm20568-201ENSMUST00000197129 208 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Gm30835-201ENSMUST00000198825 689 ntTSL 3 BASIC5.81□□□□□ -1.48
Sdc1P18828 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Gm5037-201ENSMUST00000205327 618 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sdc1P18828 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Gm45295-201ENSMUST00000210393 1046 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC5.81□□□□□ -1.48
Sdc1P18828 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC5.81□□□□□ -1.48
Sdc1P18828 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sdc1P18828 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC5.81□□□□□ -1.48
Sdc1P18828 Gm7695-201ENSMUST00000220900 641 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 AC139941.1-201ENSMUST00000221517 478 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Ndufa4-201ENSMUST00000031637 468 ntTSL 3 BASIC5.81□□□□□ -1.48
Sdc1P18828 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Sdc1P18828 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sdc1P18828 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC5.81□□□□□ -1.48
Sdc1P18828 Mir486-201ENSMUST00000093576 128 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 AC164567.3-201ENSMUST00000217743 2869 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sdc1P18828 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sdc1P18828 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sdc1P18828 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sdc1P18828 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sdc1P18828 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sdc1P18828 Dcdc5-202ENSMUST00000122388 4957 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.81□□□□□ -1.48
Sdc1P18828 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC5.81□□□□□ -1.48
Sdc1P18828 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sdc1P18828 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sdc1P18828 AC107763.1-202ENSMUST00000225021 2663 ntBASIC5.81□□□□□ -1.48
Sdc1P18828 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sdc1P18828 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Gm37730-201ENSMUST00000192432 2211 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Sdc1P18828 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Sdc1P18828 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Entpd3-201ENSMUST00000047687 3453 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 AC135119.1-204ENSMUST00000228036 2663 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
Sdc1P18828 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Gm7701-201ENSMUST00000163185 1479 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Gm14509-201ENSMUST00000117312 1286 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms