Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm5809-201ENSMUST00000121854 529 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 Mir1907-201ENSMUST00000122509 90 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC5.97□□□□□ -1.45
Cdx1P18111 1700092C02Rik-201ENSMUST00000134397 359 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx1P18111 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC5.97□□□□□ -1.45
Cdx1P18111 Gm22214-201ENSMUST00000157563 172 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 Gm7707-201ENSMUST00000165950 1156 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 Gm17235-201ENSMUST00000169128 964 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 Gm3239-202ENSMUST00000169675 519 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Cdx1P18111 Gm17572-201ENSMUST00000171455 420 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 Gm18779-201ENSMUST00000173444 577 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdx1P18111 Gm7481-201ENSMUST00000182020 995 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 Txn-ps1-201ENSMUST00000186385 309 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdx1P18111 Mir1897-202ENSMUST00000198006 79 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 AC137678.1-201ENSMUST00000198370 118 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC5.97□□□□□ -1.45
Cdx1P18111 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Cdx1P18111 Gm45674-201ENSMUST00000210043 450 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx1P18111 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx1P18111 Gm34304-201ENSMUST00000218927 1139 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdx1P18111 AC166358.1-201ENSMUST00000220677 105 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 AC153662.2-201ENSMUST00000221097 120 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 AC156037.2-201ENSMUST00000221284 112 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 AC166341.6-201ENSMUST00000221528 105 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdx1P18111 CT030242.1-201ENSMUST00000221945 125 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 AC124772.2-201ENSMUST00000222049 154 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 AC153663.1-201ENSMUST00000222165 120 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 CT030157.1-201ENSMUST00000222355 148 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 AC150661.2-201ENSMUST00000222418 105 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 AC127242.2-201ENSMUST00000223138 148 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 AC163038.4-201ENSMUST00000224942 474 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 AC131100.1-201ENSMUST00000226328 470 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 CT009515.1-201ENSMUST00000228127 586 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 CT009550.3-201ENSMUST00000228542 455 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 AC130219.2-201ENSMUST00000228765 807 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 AC122877.1-201ENSMUST00000228873 218 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx1P18111 Olfr901-201ENSMUST00000063716 936 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Cdx1P18111 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx1P18111 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Cdx1P18111 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx1P18111 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Cdx1P18111 Olfr1286-201ENSMUST00000099617 918 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Cdx1P18111 Gm10805-201ENSMUST00000099710 399 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx1P18111 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx1P18111 Gm10855-201ENSMUST00000100426 2541 ntBASIC5.97□□□□□ -1.45
Cdx1P18111 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Cdx1P18111 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Cdx1P18111 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx1P18111 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx1P18111 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx1P18111 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Cdx1P18111 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Cdx1P18111 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx1P18111 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdx1P18111 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx1P18111 Gm14144-201ENSMUST00000128602 1721 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Cdx1P18111 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Cdx1P18111 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Cdx1P18111 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC5.96□□□□□ -1.45
Cdx1P18111 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC5.96□□□□□ -1.45
Cdx1P18111 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Cdx1P18111 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Cdx1P18111 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Cdx1P18111 Phf7-206ENSMUST00000228437 1373 ntBASIC5.96□□□□□ -1.45
Cdx1P18111 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx1P18111 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx1P18111 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.96□□□□□ -1.46
Cdx1P18111 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC5.96□□□□□ -1.46
Cdx1P18111 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx1P18111 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx1P18111 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Cdx1P18111 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx1P18111 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx1P18111 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC5.96□□□□□ -1.46
Cdx1P18111 Gm14864-201ENSMUST00000116164 1087 ntBASIC5.96□□□□□ -1.46
Cdx1P18111 Gm14519-201ENSMUST00000118490 312 ntBASIC5.96□□□□□ -1.46
Cdx1P18111 Gm11198-201ENSMUST00000119771 974 ntBASIC5.96□□□□□ -1.46
Cdx1P18111 Gm13495-201ENSMUST00000121156 537 ntBASIC5.96□□□□□ -1.46
Cdx1P18111 Gm12455-201ENSMUST00000121242 416 ntBASIC5.96□□□□□ -1.46
Cdx1P18111 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx1P18111 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx1P18111 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx1P18111 Mir1962-201ENSMUST00000157516 121 ntBASIC5.96□□□□□ -1.46
Cdx1P18111 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC5.96□□□□□ -1.46
Cdx1P18111 Gm8357-201ENSMUST00000181115 1011 ntBASIC5.96□□□□□ -1.46
Cdx1P18111 Mir8114-201ENSMUST00000183582 111 ntBASIC5.96□□□□□ -1.46
Cdx1P18111 Gm8307-201ENSMUST00000187682 1150 ntBASIC5.96□□□□□ -1.46
Cdx1P18111 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC5.96□□□□□ -1.46
Cdx1P18111 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx1P18111 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC5.96□□□□□ -1.46
Cdx1P18111 Gm37481-201ENSMUST00000195176 403 ntBASIC5.96□□□□□ -1.46
Cdx1P18111 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms