Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Gm44356-201ENSMUST00000196731 111 ntBASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Gm43694-201ENSMUST00000200773 1119 ntBASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Gm42887-201ENSMUST00000202469 1119 ntBASIC6.17□□□□□ -1.42
Gm3550W4VSN7 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 CT009546.3-201ENSMUST00000220914 208 ntBASIC6.17□□□□□ -1.42
Gm3550W4VSN7 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 AC154627.1-201ENSMUST00000228799 1286 ntBASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Gm4953-201ENSMUST00000077309 483 ntBASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Mir484-201ENSMUST00000093566 67 ntBASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Gm3550W4VSN7 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Gm7562-201ENSMUST00000210502 2537 ntBASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Gm23323-201ENSMUST00000104471 133 ntBASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Gm5752-201ENSMUST00000117771 594 ntBASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Gm14053-201ENSMUST00000121662 470 ntBASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Gm15928-201ENSMUST00000122455 280 ntBASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Gm5611-201ENSMUST00000164523 852 ntBASIC6.16□□□□□ -1.42
Gm3550W4VSN7 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Gm29355-201ENSMUST00000188178 697 ntBASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Gm28953-201ENSMUST00000188336 697 ntBASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Gm20788-201ENSMUST00000190538 697 ntBASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Gm17965-201ENSMUST00000193904 517 ntBASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Gm37395-201ENSMUST00000194721 697 ntBASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Gm43555-201ENSMUST00000196588 310 ntBASIC6.16□□□□□ -1.42
Gm3550W4VSN7 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Gm7285-201ENSMUST00000198801 580 ntBASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Gm19175-201ENSMUST00000199895 916 ntBASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Olfr890-201ENSMUST00000079804 945 ntBASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Gm43515-201ENSMUST00000197930 2141 ntBASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 CT025566.1-202ENSMUST00000224800 2511 ntBASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC6.16□□□□□ -1.42
Gm3550W4VSN7 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Gm3550W4VSN7 Gm38244-201ENSMUST00000191737 2586 ntBASIC6.15□□□□□ -1.42
Gm3550W4VSN7 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Gm3550W4VSN7 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Gm3550W4VSN7 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Gm3550W4VSN7 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Gm3550W4VSN7 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
Gm3550W4VSN7 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
Gm3550W4VSN7 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Gm3550W4VSN7 Gm15576-201ENSMUST00000117806 583 ntBASIC6.15□□□□□ -1.42
Gm3550W4VSN7 Gm15049-201ENSMUST00000120474 463 ntBASIC6.15□□□□□ -1.42
Gm3550W4VSN7 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Gm3550W4VSN7 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.15□□□□□ -1.42
Gm3550W4VSN7 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Gm3550W4VSN7 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC6.15□□□□□ -1.42
Gm3550W4VSN7 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Gm3550W4VSN7 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Gm3550W4VSN7 Gm17097-201ENSMUST00000166414 714 ntBASIC6.15□□□□□ -1.42
Gm3550W4VSN7 Gm23164-201ENSMUST00000175084 111 ntBASIC6.15□□□□□ -1.42
Gm3550W4VSN7 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Gm3550W4VSN7 Gm5920-201ENSMUST00000187390 853 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms