Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm6767-201ENSMUST00000118650 1381 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 AC153143.1-201ENSMUST00000222966 1340 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC6.87□□□□□ -1.31
Use1Q9CQ56 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm25164-201ENSMUST00000158908 116 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm26729-201ENSMUST00000180744 352 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm28195-201ENSMUST00000186992 372 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm18699-201ENSMUST00000190713 243 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm38078-201ENSMUST00000192771 392 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm44356-201ENSMUST00000196731 111 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm43212-201ENSMUST00000198208 394 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm34583-203ENSMUST00000202586 454 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm18765-201ENSMUST00000203166 660 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 AC153864.1-201ENSMUST00000218482 523 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm5564-201ENSMUST00000034916 967 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm16391-201ENSMUST00000086601 447 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.86□□□□□ -1.31
Use1Q9CQ56 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.86□□□□□ -1.31
Use1Q9CQ56 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.86□□□□□ -1.31
Use1Q9CQ56 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Use1Q9CQ56 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC6.86□□□□□ -1.31
Use1Q9CQ56 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Gm16027-201ENSMUST00000161618 758 ntBASIC6.86□□□□□ -1.31
Use1Q9CQ56 Gm19840-201ENSMUST00000169624 882 ntBASIC6.86□□□□□ -1.31
Use1Q9CQ56 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Use1Q9CQ56 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC6.86□□□□□ -1.31
Use1Q9CQ56 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 CT009738.1-201ENSMUST00000219031 809 ntBASIC6.86□□□□□ -1.31
Use1Q9CQ56 Gm5668-201ENSMUST00000220897 436 ntBASIC6.86□□□□□ -1.31
Use1Q9CQ56 AC161537.1-202ENSMUST00000228450 868 ntBASIC6.86□□□□□ -1.31
Use1Q9CQ56 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Gm2531-201ENSMUST00000075609 512 ntBASIC6.86□□□□□ -1.31
Use1Q9CQ56 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Use1Q9CQ56 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Use1Q9CQ56 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.86□□□□□ -1.31
Use1Q9CQ56 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Use1Q9CQ56 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Use1Q9CQ56 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Use1Q9CQ56 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Use1Q9CQ56 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.85□□□□□ -1.31
Use1Q9CQ56 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Use1Q9CQ56 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.85□□□□□ -1.31
Use1Q9CQ56 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Use1Q9CQ56 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Use1Q9CQ56 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.85□□□□□ -1.31
Use1Q9CQ56 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms