Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Gm37609-201ENSMUST00000191778 678 ntBASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Gm19116-201ENSMUST00000218592 642 ntBASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Brpf1-201ENSMUST00000113117 4540 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Gm44021-201ENSMUST00000203055 3516 ntBASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Gm4773-201ENSMUST00000120392 702 ntBASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Gm24179-201ENSMUST00000158925 127 ntBASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Gm20396-201ENSMUST00000173358 745 ntBASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Gm34149-201ENSMUST00000203547 304 ntBASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Zfp800-201ENSMUST00000035930 3881 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Gm13940-201ENSMUST00000121023 301 ntBASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Gm24228-201ENSMUST00000158829 129 ntBASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Gm43560-201ENSMUST00000198100 773 ntBASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Gm43850-201ENSMUST00000202021 578 ntBASIC7.11□□□□□ -1.27
Cdh23Q99PF4 CT025685.1-201ENSMUST00000213716 150 ntBASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 n-R5s58-201ENSMUST00000093682 119 ntBASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Cdc6-201ENSMUST00000092706 4614 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Gm38001-201ENSMUST00000192900 3761 ntBASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cdh23Q99PF4 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 AC164978.1-201ENSMUST00000228608 4011 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm44007-201ENSMUST00000203845 2189 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm37877-201ENSMUST00000191630 2709 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm45407-201ENSMUST00000209499 3676 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm24789-201ENSMUST00000104282 131 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm24719-201ENSMUST00000157520 110 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm27299-201ENSMUST00000184593 103 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Mir6906-201ENSMUST00000198998 58 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 AC211878.6-201ENSMUST00000221896 358 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 AC122290.1-201ENSMUST00000225631 1078 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Emc1-202ENSMUST00000082262 6226 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm44950-201ENSMUST00000206403 2296 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm12959-201ENSMUST00000119396 403 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm23030-201ENSMUST00000158004 273 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm28023-201ENSMUST00000184556 60 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm27825-201ENSMUST00000184586 60 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm43141-201ENSMUST00000199695 274 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm18690-201ENSMUST00000204488 985 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 AC105958.1-201ENSMUST00000214783 2144 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Cdh23Q99PF4 AC161247.1-201ENSMUST00000217744 2295 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm13301-201ENSMUST00000121728 2446 ntBASIC7.1□□□□□ -1.27
Cdh23Q99PF4 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms