Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm13252-201ENSMUST00000119355 321 ntBASIC6.5□□□□□ -1.37
Scrt1Q99M85 Gm13921-201ENSMUST00000119411 463 ntBASIC6.5□□□□□ -1.37
Scrt1Q99M85 Gm11955-201ENSMUST00000119801 470 ntBASIC6.5□□□□□ -1.37
Scrt1Q99M85 Gm12104-201ENSMUST00000120359 979 ntBASIC6.5□□□□□ -1.37
Scrt1Q99M85 Gm13586-201ENSMUST00000121784 464 ntBASIC6.5□□□□□ -1.37
Scrt1Q99M85 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Scrt1Q99M85 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Scrt1Q99M85 Gm26357-201ENSMUST00000158218 115 ntBASIC6.5□□□□□ -1.37
Scrt1Q99M85 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC6.5□□□□□ -1.37
Scrt1Q99M85 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Scrt1Q99M85 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC6.5□□□□□ -1.37
Scrt1Q99M85 Gm25640-201ENSMUST00000175378 125 ntBASIC6.5□□□□□ -1.37
Scrt1Q99M85 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC6.5□□□□□ -1.37
Scrt1Q99M85 Gm28580-201ENSMUST00000186767 88 ntBASIC6.5□□□□□ -1.37
Scrt1Q99M85 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.5□□□□□ -1.37
Scrt1Q99M85 Gm43840-201ENSMUST00000199444 484 ntBASIC6.5□□□□□ -1.37
Scrt1Q99M85 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Scrt1Q99M85 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC6.5□□□□□ -1.37
Scrt1Q99M85 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.5□□□□□ -1.37
Scrt1Q99M85 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Scrt1Q99M85 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Scrt1Q99M85 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Scrt1Q99M85 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC6.5□□□□□ -1.37
Scrt1Q99M85 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Scrt1Q99M85 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Scrt1Q99M85 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Scrt1Q99M85 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Scrt1Q99M85 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
Scrt1Q99M85 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Scrt1Q99M85 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm10652-201ENSMUST00000199790 2622 ntBASIC6.49□□□□□ -1.37
Scrt1Q99M85 AC159193.3-201ENSMUST00000221902 2622 ntBASIC6.49□□□□□ -1.37
Scrt1Q99M85 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm38315-201ENSMUST00000194286 2437 ntBASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm37080-201ENSMUST00000194804 2404 ntBASIC6.49□□□□□ -1.37
Scrt1Q99M85 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 CT010453.1-201ENSMUST00000226795 2201 ntBASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm37199-201ENSMUST00000193881 4065 ntBASIC6.49□□□□□ -1.37
Scrt1Q99M85 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.49□□□□□ -1.37
Scrt1Q99M85 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC6.49□□□□□ -1.37
Scrt1Q99M85 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm27218-201ENSMUST00000183745 392 ntBASIC6.49□□□□□ -1.37
Scrt1Q99M85 Mir6244-201ENSMUST00000184156 117 ntBASIC6.49□□□□□ -1.37
Scrt1Q99M85 Mir8120-201ENSMUST00000185035 139 ntBASIC6.49□□□□□ -1.37
Scrt1Q99M85 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm37191-201ENSMUST00000193346 388 ntBASIC6.49□□□□□ -1.37
Scrt1Q99M85 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 AC154595.1-201ENSMUST00000225533 1059 ntBASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm26264-201ENSMUST00000083278 159 ntBASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm22581-201ENSMUST00000083735 136 ntBASIC6.49□□□□□ -1.37
Scrt1Q99M85 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 AC091783.1-201ENSMUST00000223614 1613 ntBASIC6.49□□□□□ -1.37
Scrt1Q99M85 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm8428-201ENSMUST00000159919 1784 ntBASIC6.49□□□□□ -1.37
Scrt1Q99M85 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Scrt1Q99M85 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Scrt1Q99M85 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms