Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Trub1Q8C0D0 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
Trub1Q8C0D0 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Trub1Q8C0D0 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Trub1Q8C0D0 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
Trub1Q8C0D0 Gm44652-201ENSMUST00000208648 2854 ntBASIC7.46□□□□□ -1.21
Trub1Q8C0D0 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Trub1Q8C0D0 CT009757.6-201ENSMUST00000220661 2312 ntBASIC7.46□□□□□ -1.21
Trub1Q8C0D0 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Trub1Q8C0D0 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
Trub1Q8C0D0 Gm45354-201ENSMUST00000199820 2557 ntBASIC7.46□□□□□ -1.21
Trub1Q8C0D0 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Trub1Q8C0D0 Gm42636-201ENSMUST00000197174 2239 ntBASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Gm25614-201ENSMUST00000104013 133 ntBASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Gm24986-201ENSMUST00000104452 132 ntBASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Gm15203-201ENSMUST00000117668 455 ntBASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Gm22149-202ENSMUST00000196259 137 ntBASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 AC120002.1-201ENSMUST00000218456 331 ntBASIC7.46□□□□□ -1.22
Trub1Q8C0D0 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Gm8616-201ENSMUST00000222175 1037 ntBASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Gm16204-201ENSMUST00000117864 1897 ntBASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 AC122426.2-201ENSMUST00000216522 2947 ntBASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC7.46□□□□□ -1.22
Trub1Q8C0D0 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gm38009-201ENSMUST00000194884 3341 ntBASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gm15778-201ENSMUST00000118469 608 ntBASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gm14251-201ENSMUST00000122133 279 ntBASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gm22275-201ENSMUST00000122470 310 ntBASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gm10913-201ENSMUST00000133732 463 ntBASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gm4613-201ENSMUST00000165488 276 ntBASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gm8357-201ENSMUST00000181115 1011 ntBASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gm21430-201ENSMUST00000182998 998 ntBASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gm38022-201ENSMUST00000191762 403 ntBASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gm7419-201ENSMUST00000209962 925 ntBASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC7.45□□□□□ -1.22
Trub1Q8C0D0 CT030166.4-201ENSMUST00000220640 404 ntBASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 CT030182.4-201ENSMUST00000223647 645 ntBASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gm6054-201ENSMUST00000078052 378 ntBASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC7.45□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms