Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 AC159264.1-202ENSMUST00000224856 3162 ntBASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Crebbp-205ENSMUST00000205765 7749 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Gm25178-201ENSMUST00000122633 325 ntBASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Gm24435-201ENSMUST00000157886 110 ntBASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Gm28885-201ENSMUST00000185615 563 ntBASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Gm37901-201ENSMUST00000195107 514 ntBASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Gm38574-201ENSMUST00000211855 640 ntBASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Olfr1410-202ENSMUST00000216553 5433 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Bmpr1b-201ENSMUST00000029948 5349 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 D630045J12Rik-206ENSMUST00000169256 10968 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Map3k19-205ENSMUST00000208183 4865 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Dysf-203ENSMUST00000113818 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Gm43429-201ENSMUST00000197889 2251 ntBASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Klf12-205ENSMUST00000228216 5890 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Gm18305-201ENSMUST00000216532 2128 ntBASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Snord88a-201ENSMUST00000116723 90 ntBASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Gm12710-201ENSMUST00000119011 216 ntBASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Gm14251-201ENSMUST00000122133 279 ntBASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Gm24176-201ENSMUST00000158928 121 ntBASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Gm4613-201ENSMUST00000165488 276 ntBASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Gm6726-201ENSMUST00000172786 681 ntBASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Gm7426-201ENSMUST00000179046 404 ntBASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Gm19035-202ENSMUST00000194575 959 ntBASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Gm18012-201ENSMUST00000204558 773 ntBASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Gm2774-201ENSMUST00000213650 1165 ntBASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 AC131187.2-201ENSMUST00000223936 994 ntBASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 CT009711.2-201ENSMUST00000225352 934 ntBASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Gm43519-201ENSMUST00000197239 1872 ntBASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col16a1Q8BLX7 Gm42668-201ENSMUST00000200747 2487 ntBASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Cndp1-201ENSMUST00000070139 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Myh4-202ENSMUST00000170942 5912 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Gm8812-201ENSMUST00000118496 412 ntBASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Gm34424-201ENSMUST00000213400 782 ntBASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 AC073562.1-201ENSMUST00000222117 401 ntBASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Rnf19a-203ENSMUST00000228358 3452 ntBASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Stil-201ENSMUST00000030490 5285 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col16a1Q8BLX7 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms