Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
AtmQ62388 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
AtmQ62388 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC6.67□□□□□ -1.34
AtmQ62388 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
AtmQ62388 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.67□□□□□ -1.34
AtmQ62388 Gm5272-201ENSMUST00000182730 982 ntBASIC6.67□□□□□ -1.34
AtmQ62388 Gm2229-201ENSMUST00000193328 710 ntBASIC6.67□□□□□ -1.34
AtmQ62388 Mir6906-201ENSMUST00000198998 58 ntBASIC6.67□□□□□ -1.34
AtmQ62388 Gm18980-201ENSMUST00000199098 1079 ntBASIC6.67□□□□□ -1.34
AtmQ62388 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.67□□□□□ -1.34
AtmQ62388 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.67□□□□□ -1.34
AtmQ62388 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
AtmQ62388 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
AtmQ62388 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
AtmQ62388 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
AtmQ62388 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
AtmQ62388 Rfpl4-201ENSMUST00000045215 1598 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
AtmQ62388 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
AtmQ62388 Arhgef9-207ENSMUST00000113885 4578 ntTSL 5 BASIC6.67□□□□□ -1.34
AtmQ62388 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 Klf5-202ENSMUST00000226784 2852 ntBASIC6.66□□□□□ -1.34
AtmQ62388 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
AtmQ62388 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
AtmQ62388 Gm12643-201ENSMUST00000116078 374 ntBASIC6.66□□□□□ -1.34
AtmQ62388 Gm4919-201ENSMUST00000117825 604 ntBASIC6.66□□□□□ -1.34
AtmQ62388 Gm11976-201ENSMUST00000119236 295 ntBASIC6.66□□□□□ -1.34
AtmQ62388 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC6.66□□□□□ -1.34
AtmQ62388 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.66□□□□□ -1.34
AtmQ62388 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.66□□□□□ -1.34
AtmQ62388 AC159205.4-201ENSMUST00000225964 704 ntBASIC6.66□□□□□ -1.34
AtmQ62388 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
AtmQ62388 Gm43331-201ENSMUST00000197991 1689 ntBASIC6.66□□□□□ -1.34
AtmQ62388 Gm37373-201ENSMUST00000194005 2812 ntBASIC6.66□□□□□ -1.34
AtmQ62388 Gm40841-202ENSMUST00000222823 3989 ntTSL 5 BASIC6.66□□□□□ -1.34
AtmQ62388 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.66□□□□□ -1.34
AtmQ62388 Gm22371-201ENSMUST00000104588 130 ntBASIC6.66□□□□□ -1.34
AtmQ62388 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
AtmQ62388 Gm14521-201ENSMUST00000119545 350 ntBASIC6.66□□□□□ -1.34
AtmQ62388 Gm2709-201ENSMUST00000142979 350 ntBASIC6.66□□□□□ -1.34
AtmQ62388 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC6.66□□□□□ -1.34
AtmQ62388 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.66□□□□□ -1.34
AtmQ62388 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.66□□□□□ -1.34
AtmQ62388 Gm5055-201ENSMUST00000215697 581 ntBASIC6.66□□□□□ -1.34
AtmQ62388 Gm19116-201ENSMUST00000218592 642 ntBASIC6.66□□□□□ -1.34
AtmQ62388 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.66□□□□□ -1.34
AtmQ62388 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.66□□□□□ -1.34
AtmQ62388 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 Drosha-201ENSMUST00000090292 4519 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.66□□□□□ -1.34
AtmQ62388 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
AtmQ62388 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 Gm37647-201ENSMUST00000194556 3143 ntBASIC6.66□□□□□ -1.34
AtmQ62388 A630001O12Rik-201ENSMUST00000212914 2182 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
AtmQ62388 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
AtmQ62388 Gm14070-201ENSMUST00000120773 428 ntBASIC6.65□□□□□ -1.34
AtmQ62388 Gm22210-201ENSMUST00000158101 144 ntBASIC6.65□□□□□ -1.34
AtmQ62388 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.65□□□□□ -1.34
AtmQ62388 Mir3572-201ENSMUST00000175549 86 ntBASIC6.65□□□□□ -1.34
AtmQ62388 Gm28467-201ENSMUST00000190981 318 ntBASIC6.65□□□□□ -1.34
AtmQ62388 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.65□□□□□ -1.34
AtmQ62388 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
AtmQ62388 AC153870.1-201ENSMUST00000219599 560 ntBASIC6.65□□□□□ -1.34
AtmQ62388 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.65□□□□□ -1.34
AtmQ62388 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
AtmQ62388 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
AtmQ62388 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
AtmQ62388 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
AtmQ62388 Mbtd1-205ENSMUST00000107853 5245 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
AtmQ62388 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
AtmQ62388 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
AtmQ62388 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
AtmQ62388 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
AtmQ62388 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
AtmQ62388 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
AtmQ62388 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
AtmQ62388 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
AtmQ62388 Gm18305-201ENSMUST00000216532 2128 ntBASIC6.65□□□□□ -1.34
AtmQ62388 Gm35172-201ENSMUST00000196037 2649 ntBASIC6.65□□□□□ -1.34
AtmQ62388 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC6.65□□□□□ -1.34
AtmQ62388 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
AtmQ62388 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
AtmQ62388 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
AtmQ62388 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
AtmQ62388 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
AtmQ62388 Gm14529-201ENSMUST00000117894 406 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms