Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 AC107452.3-201ENSMUST00000228807 1308 ntBASIC8.7□□□□□ -1.02
Vps54Q5SPW0 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Vps54Q5SPW0 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.7□□□□□ -1.02
Vps54Q5SPW0 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Vps54Q5SPW0 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Vps54Q5SPW0 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Vps54Q5SPW0 Gm37535-201ENSMUST00000194442 2365 ntBASIC8.7□□□□□ -1.02
Vps54Q5SPW0 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Vps54Q5SPW0 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Vps54Q5SPW0 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Gm43331-201ENSMUST00000197991 1689 ntBASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Gm45477-201ENSMUST00000200213 5498 ntBASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Gm22702-201ENSMUST00000175372 69 ntBASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Gm23018-201ENSMUST00000177928 109 ntBASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Gm42464-202ENSMUST00000198111 774 ntBASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Gm45782-201ENSMUST00000212670 366 ntBASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Gm46379-201ENSMUST00000222551 265 ntBASIC8.69□□□□□ -1.02
Vps54Q5SPW0 AC165260.3-201ENSMUST00000225101 665 ntBASIC8.69□□□□□ -1.02
Vps54Q5SPW0 AC121997.2-202ENSMUST00000227158 939 ntBASIC8.69□□□□□ -1.02
Vps54Q5SPW0 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Gm24924-201ENSMUST00000084007 164 ntBASIC8.69□□□□□ -1.02
Vps54Q5SPW0 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Gm37906-201ENSMUST00000192050 3035 ntBASIC8.69□□□□□ -1.02
Vps54Q5SPW0 Gm45201-201ENSMUST00000207187 2679 ntBASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Snhg17-209ENSMUST00000186993 3144 ntBASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Gm22707-201ENSMUST00000103834 110 ntBASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Gm14904-201ENSMUST00000117067 335 ntBASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Gm6743-201ENSMUST00000117345 1066 ntBASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Gm15203-201ENSMUST00000117668 455 ntBASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Gm13486-201ENSMUST00000119910 282 ntBASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Gm16357-201ENSMUST00000144091 474 ntBASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Gm27866-201ENSMUST00000184459 171 ntBASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Gm28952-201ENSMUST00000189285 681 ntBASIC8.68□□□□□ -1.02
Vps54Q5SPW0 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Gm44471-201ENSMUST00000197963 100 ntBASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Gm42804-201ENSMUST00000199701 178 ntBASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Gm35638-201ENSMUST00000220724 652 ntBASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Mir138-2-201ENSMUST00000083578 71 ntBASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Vps54Q5SPW0 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Vps54Q5SPW0 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Vps54Q5SPW0 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Vps54Q5SPW0 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Vps54Q5SPW0 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Vps54Q5SPW0 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC8.67□□□□□ -1.02
Vps54Q5SPW0 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Vps54Q5SPW0 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Vps54Q5SPW0 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
Vps54Q5SPW0 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms