Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smarcc1P97496 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smarcc1P97496 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smarcc1P97496 Gm42700-201ENSMUST00000199071 2437 ntBASIC9.33□□□□□ -0.92
Smarcc1P97496 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC9.33□□□□□ -0.92
Smarcc1P97496 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smarcc1P97496 Gm2108-201ENSMUST00000165058 2177 ntBASIC9.33□□□□□ -0.92
Smarcc1P97496 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC9.33□□□□□ -0.92
Smarcc1P97496 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smarcc1P97496 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smarcc1P97496 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smarcc1P97496 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smarcc1P97496 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smarcc1P97496 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Smarcc1P97496 Zdhhc22-202ENSMUST00000222543 3462 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Smarcc1P97496 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smarcc1P97496 Npr3-204ENSMUST00000228489 1969 ntBASIC9.32□□□□□ -0.92
Smarcc1P97496 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smarcc1P97496 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smarcc1P97496 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smarcc1P97496 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smarcc1P97496 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Smarcc1P97496 Gm11320-201ENSMUST00000119434 463 ntBASIC9.32□□□□□ -0.92
Smarcc1P97496 Gm26480-201ENSMUST00000122619 297 ntBASIC9.32□□□□□ -0.92
Smarcc1P97496 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC9.32□□□□□ -0.92
Smarcc1P97496 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC9.32□□□□□ -0.92
Smarcc1P97496 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC9.32□□□□□ -0.92
Smarcc1P97496 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC9.32□□□□□ -0.92
Smarcc1P97496 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC9.32□□□□□ -0.92
Smarcc1P97496 Gm24239-201ENSMUST00000157791 255 ntBASIC9.32□□□□□ -0.92
Smarcc1P97496 Gm22764-201ENSMUST00000158370 92 ntBASIC9.32□□□□□ -0.92
Smarcc1P97496 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smarcc1P97496 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC9.32□□□□□ -0.92
Smarcc1P97496 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Smarcc1P97496 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Smarcc1P97496 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC9.32□□□□□ -0.92
Smarcc1P97496 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC9.32□□□□□ -0.92
Smarcc1P97496 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC9.32□□□□□ -0.92
Smarcc1P97496 Gm43048-201ENSMUST00000196101 388 ntBASIC9.32□□□□□ -0.92
Smarcc1P97496 Gm42708-201ENSMUST00000196332 905 ntBASIC9.32□□□□□ -0.92
Smarcc1P97496 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smarcc1P97496 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smarcc1P97496 Gm18960-201ENSMUST00000222962 713 ntBASIC9.32□□□□□ -0.92
Smarcc1P97496 Zmym2-202ENSMUST00000223669 1281 ntBASIC9.32□□□□□ -0.92
Smarcc1P97496 AC114008.1-201ENSMUST00000226193 937 ntBASIC9.32□□□□□ -0.92
Smarcc1P97496 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC9.32□□□□□ -0.92
Smarcc1P97496 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Smarcc1P97496 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smarcc1P97496 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC9.32□□□□□ -0.92
Smarcc1P97496 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smarcc1P97496 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smarcc1P97496 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Smarcc1P97496 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC9.32□□□□□ -0.92
Smarcc1P97496 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smarcc1P97496 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC9.32□□□□□ -0.92
Smarcc1P97496 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smarcc1P97496 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smarcc1P97496 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Smarcc1P97496 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
Smarcc1P97496 Gm37877-201ENSMUST00000191630 2709 ntBASIC9.32□□□□□ -0.92
Smarcc1P97496 Gm44769-201ENSMUST00000206120 2809 ntBASIC9.32□□□□□ -0.92
Smarcc1P97496 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc1P97496 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC9.31□□□□□ -0.92
Smarcc1P97496 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc1P97496 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc1P97496 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc1P97496 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Smarcc1P97496 AC158605.4-201ENSMUST00000219013 3361 ntBASIC9.31□□□□□ -0.92
Smarcc1P97496 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc1P97496 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc1P97496 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC9.31□□□□□ -0.92
Smarcc1P97496 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Smarcc1P97496 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC9.31□□□□□ -0.92
Smarcc1P97496 Gm16221-201ENSMUST00000117331 393 ntBASIC9.31□□□□□ -0.92
Smarcc1P97496 Gm15047-201ENSMUST00000118891 454 ntBASIC9.31□□□□□ -0.92
Smarcc1P97496 Gm9439-201ENSMUST00000119554 973 ntBASIC9.31□□□□□ -0.92
Smarcc1P97496 Gm11370-201ENSMUST00000120583 260 ntBASIC9.31□□□□□ -0.92
Smarcc1P97496 Gm8722-201ENSMUST00000121466 769 ntBASIC9.31□□□□□ -0.92
Smarcc1P97496 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC9.31□□□□□ -0.92
Smarcc1P97496 Gm23673-201ENSMUST00000157474 298 ntBASIC9.31□□□□□ -0.92
Smarcc1P97496 Gm24050-201ENSMUST00000158623 290 ntBASIC9.31□□□□□ -0.92
Smarcc1P97496 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC9.31□□□□□ -0.92
Smarcc1P97496 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC9.31□□□□□ -0.92
Smarcc1P97496 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Smarcc1P97496 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc1P97496 Mir7033-201ENSMUST00000184259 81 ntBASIC9.31□□□□□ -0.92
Smarcc1P97496 Gm5261-201ENSMUST00000185860 713 ntBASIC9.31□□□□□ -0.92
Smarcc1P97496 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC9.31□□□□□ -0.92
Smarcc1P97496 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smarcc1P97496 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC9.31□□□□□ -0.92
Smarcc1P97496 Gm44374-201ENSMUST00000199821 140 ntBASIC9.31□□□□□ -0.92
Smarcc1P97496 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC9.31□□□□□ -0.92
Smarcc1P97496 Gm46424-201ENSMUST00000221567 168 ntBASIC9.31□□□□□ -0.92
Smarcc1P97496 Gm2754-201ENSMUST00000223383 589 ntBASIC9.31□□□□□ -0.92
Smarcc1P97496 AC124489.3-201ENSMUST00000224037 278 ntBASIC9.31□□□□□ -0.92
Smarcc1P97496 AC159267.1-201ENSMUST00000226702 678 ntBASIC9.31□□□□□ -0.92
Smarcc1P97496 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Smarcc1P97496 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Smarcc1P97496 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
Smarcc1P97496 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms