Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 AC133598.4-201ENSMUST00000224577 454 ntBASIC7.98□□□□□ -1.13
CiitaP79621 CT025630.2-201ENSMUST00000228293 487 ntBASIC7.98□□□□□ -1.13
CiitaP79621 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CiitaP79621 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CiitaP79621 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CiitaP79621 Supt20-202ENSMUST00000170552 1968 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CiitaP79621 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
CiitaP79621 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CiitaP79621 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CiitaP79621 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC7.98□□□□□ -1.13
CiitaP79621 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CiitaP79621 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CiitaP79621 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CiitaP79621 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CiitaP79621 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CiitaP79621 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CiitaP79621 Gm2065-201ENSMUST00000194697 2757 ntBASIC7.98□□□□□ -1.13
CiitaP79621 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC7.98□□□□□ -1.13
CiitaP79621 Gm43775-201ENSMUST00000201019 3395 ntBASIC7.97□□□□□ -1.13
CiitaP79621 Gm37520-201ENSMUST00000194883 2672 ntBASIC7.97□□□□□ -1.13
CiitaP79621 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CiitaP79621 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CiitaP79621 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
CiitaP79621 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CiitaP79621 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CiitaP79621 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CiitaP79621 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CiitaP79621 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC7.97□□□□□ -1.13
CiitaP79621 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
CiitaP79621 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CiitaP79621 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CiitaP79621 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
CiitaP79621 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CiitaP79621 Gm15105-201ENSMUST00000117777 204 ntBASIC7.97□□□□□ -1.13
CiitaP79621 Gm14990-201ENSMUST00000122354 445 ntBASIC7.97□□□□□ -1.13
CiitaP79621 Gm7420-201ENSMUST00000162836 842 ntBASIC7.97□□□□□ -1.13
CiitaP79621 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CiitaP79621 Gm23018-201ENSMUST00000177928 109 ntBASIC7.97□□□□□ -1.13
CiitaP79621 Mir6357-201ENSMUST00000184246 104 ntBASIC7.97□□□□□ -1.13
CiitaP79621 Gm28416-201ENSMUST00000188334 292 ntBASIC7.97□□□□□ -1.13
CiitaP79621 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC7.97□□□□□ -1.13
CiitaP79621 Gm4247-201ENSMUST00000211441 1042 ntBASIC7.97□□□□□ -1.13
CiitaP79621 Gm7368-201ENSMUST00000213307 367 ntBASIC7.97□□□□□ -1.13
CiitaP79621 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
CiitaP79621 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
CiitaP79621 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC7.97□□□□□ -1.13
CiitaP79621 AC154361.1-201ENSMUST00000225694 745 ntBASIC7.97□□□□□ -1.13
CiitaP79621 Gm5514-201ENSMUST00000060477 306 ntBASIC7.97□□□□□ -1.13
CiitaP79621 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
CiitaP79621 Mir138-2-201ENSMUST00000083578 71 ntBASIC7.97□□□□□ -1.13
CiitaP79621 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CiitaP79621 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC7.97□□□□□ -1.13
CiitaP79621 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CiitaP79621 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CiitaP79621 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
CiitaP79621 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC7.97□□□□□ -1.13
CiitaP79621 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CiitaP79621 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CiitaP79621 Gm5841-201ENSMUST00000195307 2177 ntBASIC7.97□□□□□ -1.13
CiitaP79621 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CiitaP79621 Gm43113-201ENSMUST00000199713 1754 ntBASIC7.97□□□□□ -1.13
CiitaP79621 Gm37611-201ENSMUST00000195250 2028 ntBASIC7.96□□□□□ -1.13
CiitaP79621 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CiitaP79621 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CiitaP79621 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
CiitaP79621 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CiitaP79621 AC154270.2-201ENSMUST00000226755 2306 ntBASIC7.96□□□□□ -1.13
CiitaP79621 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CiitaP79621 CR974429.2-201ENSMUST00000221883 1696 ntBASIC7.96□□□□□ -1.13
CiitaP79621 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CiitaP79621 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
CiitaP79621 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CiitaP79621 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CiitaP79621 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CiitaP79621 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
CiitaP79621 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC7.96□□□□□ -1.14
CiitaP79621 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
CiitaP79621 Gm13739-201ENSMUST00000118020 530 ntBASIC7.96□□□□□ -1.14
CiitaP79621 Gm12944-201ENSMUST00000119262 463 ntBASIC7.96□□□□□ -1.14
CiitaP79621 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC7.96□□□□□ -1.14
CiitaP79621 Gm11962-201ENSMUST00000145746 255 ntBASIC7.96□□□□□ -1.14
CiitaP79621 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC7.96□□□□□ -1.14
CiitaP79621 Gm23077-201ENSMUST00000157854 116 ntBASIC7.96□□□□□ -1.14
CiitaP79621 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC7.96□□□□□ -1.14
CiitaP79621 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CiitaP79621 Gm5261-201ENSMUST00000185860 713 ntBASIC7.96□□□□□ -1.14
CiitaP79621 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CiitaP79621 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CiitaP79621 Gm8101-201ENSMUST00000192796 478 ntBASIC7.96□□□□□ -1.14
CiitaP79621 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC7.96□□□□□ -1.14
CiitaP79621 Gm44112-201ENSMUST00000204787 372 ntBASIC7.96□□□□□ -1.14
CiitaP79621 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CiitaP79621 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC7.96□□□□□ -1.14
CiitaP79621 AC151971.2-201ENSMUST00000217540 909 ntBASIC7.96□□□□□ -1.14
CiitaP79621 AC122539.1-201ENSMUST00000219925 329 ntBASIC7.96□□□□□ -1.14
CiitaP79621 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC7.96□□□□□ -1.14
CiitaP79621 AC130219.2-201ENSMUST00000228765 807 ntBASIC7.96□□□□□ -1.14
CiitaP79621 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CiitaP79621 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CiitaP79621 Gm45201-201ENSMUST00000207187 2679 ntBASIC7.96□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms