Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nphp4P59240 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nphp4P59240 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC9.82□□□□□ -0.84
Nphp4P59240 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nphp4P59240 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nphp4P59240 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nphp4P59240 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nphp4P59240 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC9.82□□□□□ -0.84
Nphp4P59240 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nphp4P59240 Gm14729-201ENSMUST00000118373 689 ntBASIC9.82□□□□□ -0.84
Nphp4P59240 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Nphp4P59240 Gm8089-201ENSMUST00000122463 968 ntBASIC9.82□□□□□ -0.84
Nphp4P59240 BC064078-201ENSMUST00000122939 570 ntBASIC9.82□□□□□ -0.84
Nphp4P59240 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC9.82□□□□□ -0.84
Nphp4P59240 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nphp4P59240 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC9.82□□□□□ -0.84
Nphp4P59240 Gm27186-201ENSMUST00000184223 307 ntBASIC9.82□□□□□ -0.84
Nphp4P59240 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nphp4P59240 Gm38177-201ENSMUST00000192213 1040 ntBASIC9.82□□□□□ -0.84
Nphp4P59240 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nphp4P59240 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Nphp4P59240 n-R5s217-201ENSMUST00000083341 116 ntBASIC9.82□□□□□ -0.84
Nphp4P59240 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC9.82□□□□□ -0.84
Nphp4P59240 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC9.81□□□□□ -0.84
Nphp4P59240 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Nphp4P59240 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Nphp4P59240 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Nphp4P59240 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Nphp4P59240 Hivep2-205ENSMUST00000191138 9846 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
Nphp4P59240 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Mbnl2-203ENSMUST00000226800 3328 ntBASIC9.81□□□□□ -0.84
Nphp4P59240 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 AC171003.1-201ENSMUST00000221667 1665 ntBASIC9.81□□□□□ -0.84
Nphp4P59240 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
Nphp4P59240 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Nphp4P59240 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC9.81□□□□□ -0.84
Nphp4P59240 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Nphp4P59240 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Nphp4P59240 Gm13352-201ENSMUST00000117515 262 ntBASIC9.81□□□□□ -0.84
Nphp4P59240 Gm14847-201ENSMUST00000121978 519 ntBASIC9.81□□□□□ -0.84
Nphp4P59240 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC9.81□□□□□ -0.84
Nphp4P59240 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC9.81□□□□□ -0.84
Nphp4P59240 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC9.81□□□□□ -0.84
Nphp4P59240 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC9.81□□□□□ -0.84
Nphp4P59240 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC9.81□□□□□ -0.84
Nphp4P59240 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC9.81□□□□□ -0.84
Nphp4P59240 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Mir5617-201ENSMUST00000176786 57 ntBASIC9.81□□□□□ -0.84
Nphp4P59240 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC9.81□□□□□ -0.84
Nphp4P59240 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC9.81□□□□□ -0.84
Nphp4P59240 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC9.81□□□□□ -0.84
Nphp4P59240 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Gm37620-201ENSMUST00000192910 501 ntBASIC9.81□□□□□ -0.84
Nphp4P59240 Gm3511-201ENSMUST00000199823 204 ntBASIC9.81□□□□□ -0.84
Nphp4P59240 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC9.81□□□□□ -0.84
Nphp4P59240 Gm45782-201ENSMUST00000212670 366 ntBASIC9.81□□□□□ -0.84
Nphp4P59240 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC9.81□□□□□ -0.84
Nphp4P59240 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Nphp4P59240 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nphp4P59240 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Nphp4P59240 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nphp4P59240 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nphp4P59240 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nphp4P59240 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nphp4P59240 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nphp4P59240 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Nphp4P59240 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nphp4P59240 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Nphp4P59240 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
Nphp4P59240 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nphp4P59240 Gm42692-201ENSMUST00000199482 2833 ntBASIC9.8□□□□□ -0.84
Nphp4P59240 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC9.8□□□□□ -0.84
Nphp4P59240 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nphp4P59240 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nphp4P59240 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nphp4P59240 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nphp4P59240 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Nphp4P59240 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
Nphp4P59240 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nphp4P59240 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nphp4P59240 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nphp4P59240 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nphp4P59240 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nphp4P59240 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms