Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm26436-201ENSMUST00000180325 132 ntBASIC8.03□□□□□ -1.12
Tpm1P58771 Gm26729-201ENSMUST00000180744 352 ntBASIC8.03□□□□□ -1.12
Tpm1P58771 Gm26612-201ENSMUST00000180785 1055 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Tpm1P58771 Gm4891-201ENSMUST00000182279 912 ntBASIC8.03□□□□□ -1.12
Tpm1P58771 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Tpm1P58771 Gm37152-201ENSMUST00000193369 1175 ntBASIC8.03□□□□□ -1.12
Tpm1P58771 Gm37349-201ENSMUST00000194205 624 ntBASIC8.03□□□□□ -1.12
Tpm1P58771 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Tpm1P58771 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.03□□□□□ -1.12
Tpm1P58771 AC124686.1-201ENSMUST00000225546 522 ntBASIC8.03□□□□□ -1.12
Tpm1P58771 Vmn1r41-204ENSMUST00000227039 985 ntBASIC8.03□□□□□ -1.12
Tpm1P58771 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Tpm1P58771 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Tpm1P58771 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Tpm1P58771 Olfr5-201ENSMUST00000086318 1044 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Tpm1P58771 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Tpm1P58771 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
Tpm1P58771 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC8.03□□□□□ -1.12
Tpm1P58771 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Tpm1P58771 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Tpm1P58771 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Tpm1P58771 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC8.03□□□□□ -1.12
Tpm1P58771 Gm44441-201ENSMUST00000203642 2475 ntBASIC8.03□□□□□ -1.12
Tpm1P58771 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Tpm1P58771 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Tpm1P58771 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Tpm1P58771 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Tpm1P58771 Gm37043-201ENSMUST00000194609 3105 ntBASIC8.03□□□□□ -1.12
Tpm1P58771 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Tpm1P58771 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Tpm1P58771 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.12
Tpm1P58771 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC8.02□□□□□ -1.12
Tpm1P58771 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Tpm1P58771 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Tpm1P58771 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Tpm1P58771 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Tpm1P58771 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Tpm1P58771 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
Tpm1P58771 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Tpm1P58771 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Tpm1P58771 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Tpm1P58771 Gm38262-201ENSMUST00000194760 1382 ntBASIC8.02□□□□□ -1.13
Tpm1P58771 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Tpm1P58771 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Tpm1P58771 Olfr353-201ENSMUST00000100149 936 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Tpm1P58771 Gm11951-201ENSMUST00000116005 431 ntBASIC8.02□□□□□ -1.13
Tpm1P58771 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC8.02□□□□□ -1.13
Tpm1P58771 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC8.02□□□□□ -1.13
Tpm1P58771 Defa-ps3-201ENSMUST00000142705 282 ntBASIC8.02□□□□□ -1.13
Tpm1P58771 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Tpm1P58771 Gm23007-201ENSMUST00000158951 177 ntBASIC8.02□□□□□ -1.13
Tpm1P58771 Ifrd1-204ENSMUST00000165027 1293 ntTSL 5 BASIC8.02□□□□□ -1.13
Tpm1P58771 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC8.02□□□□□ -1.13
Tpm1P58771 Gm25692-201ENSMUST00000175444 125 ntBASIC8.02□□□□□ -1.13
Tpm1P58771 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Tpm1P58771 Gm37339-201ENSMUST00000194142 392 ntBASIC8.02□□□□□ -1.13
Tpm1P58771 Gm35108-201ENSMUST00000194321 699 ntBASIC8.02□□□□□ -1.13
Tpm1P58771 Gm33191-201ENSMUST00000195604 699 ntBASIC8.02□□□□□ -1.13
Tpm1P58771 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC8.02□□□□□ -1.13
Tpm1P58771 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC8.02□□□□□ -1.13
Tpm1P58771 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Tpm1P58771 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC8.02□□□□□ -1.13
Tpm1P58771 Gm44982-201ENSMUST00000208795 471 ntBASIC8.02□□□□□ -1.13
Tpm1P58771 Gm33096-201ENSMUST00000210189 493 ntBASIC8.02□□□□□ -1.13
Tpm1P58771 AC164087.2-201ENSMUST00000216206 1072 ntBASIC8.02□□□□□ -1.13
Tpm1P58771 AC107663.2-201ENSMUST00000225534 1234 ntBASIC8.02□□□□□ -1.13
Tpm1P58771 AC172989.1-201ENSMUST00000226387 513 ntBASIC8.02□□□□□ -1.13
Tpm1P58771 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Tpm1P58771 Gm5564-201ENSMUST00000034916 967 ntBASIC8.02□□□□□ -1.13
Tpm1P58771 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Tpm1P58771 Olfr698-201ENSMUST00000074981 936 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Tpm1P58771 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC8.02□□□□□ -1.13
Tpm1P58771 Gm4825-201ENSMUST00000079690 408 ntBASIC8.02□□□□□ -1.13
Tpm1P58771 Gm6304-201ENSMUST00000096579 447 ntBASIC8.02□□□□□ -1.13
Tpm1P58771 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Tpm1P58771 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Tpm1P58771 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Tpm1P58771 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC8.02□□□□□ -1.13
Tpm1P58771 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Tpm1P58771 Gm44231-201ENSMUST00000204106 4075 ntBASIC8.02□□□□□ -1.13
Tpm1P58771 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC8.02□□□□□ -1.13
Tpm1P58771 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Tpm1P58771 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Tpm1P58771 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Tpm1P58771 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Tpm1P58771 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Tpm1P58771 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Tpm1P58771 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Tpm1P58771 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Tpm1P58771 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Tpm1P58771 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC8.01□□□□□ -1.13
Tpm1P58771 Gm19801-201ENSMUST00000218231 1882 ntBASIC8.01□□□□□ -1.13
Tpm1P58771 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Tpm1P58771 Gm22900-201ENSMUST00000104538 130 ntBASIC8.01□□□□□ -1.13
Tpm1P58771 Gm15154-201ENSMUST00000117590 366 ntBASIC8.01□□□□□ -1.13
Tpm1P58771 Gm11796-201ENSMUST00000120208 972 ntBASIC8.01□□□□□ -1.13
Tpm1P58771 Gm15062-201ENSMUST00000120567 367 ntBASIC8.01□□□□□ -1.13
Tpm1P58771 Gm25178-201ENSMUST00000122633 325 ntBASIC8.01□□□□□ -1.13
Tpm1P58771 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC8.01□□□□□ -1.13
Tpm1P58771 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms