Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Rfx3P48381 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx3P48381 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Rfx3P48381 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx3P48381 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.6□□□□□ -1.35
Rfx3P48381 Gm5903-201ENSMUST00000121836 2325 ntBASIC6.6□□□□□ -1.35
Rfx3P48381 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Rfx3P48381 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.6□□□□□ -1.35
Rfx3P48381 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC6.6□□□□□ -1.35
Rfx3P48381 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx3P48381 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC6.6□□□□□ -1.35
Rfx3P48381 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Rfx3P48381 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx3P48381 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC6.59□□□□□ -1.35
Rfx3P48381 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.59□□□□□ -1.35
Rfx3P48381 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.59□□□□□ -1.35
Rfx3P48381 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.59□□□□□ -1.35
Rfx3P48381 Gm25167-201ENSMUST00000104188 120 ntBASIC6.59□□□□□ -1.35
Rfx3P48381 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Rfx3P48381 Gm15422-201ENSMUST00000117453 541 ntBASIC6.59□□□□□ -1.35
Rfx3P48381 Gm14584-201ENSMUST00000118956 637 ntBASIC6.59□□□□□ -1.35
Rfx3P48381 Gm16056-201ENSMUST00000119293 135 ntBASIC6.59□□□□□ -1.35
Rfx3P48381 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.59□□□□□ -1.35
Rfx3P48381 Gm11259-201ENSMUST00000120554 715 ntBASIC6.59□□□□□ -1.35
Rfx3P48381 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 Trav8-2-201ENSMUST00000130122 337 ntBASIC6.59□□□□□ -1.35
Rfx3P48381 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC6.59□□□□□ -1.35
Rfx3P48381 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC6.59□□□□□ -1.35
Rfx3P48381 Mir8095-201ENSMUST00000185103 129 ntBASIC6.59□□□□□ -1.35
Rfx3P48381 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC6.59□□□□□ -1.35
Rfx3P48381 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC6.59□□□□□ -1.35
Rfx3P48381 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC6.59□□□□□ -1.35
Rfx3P48381 Gm44471-201ENSMUST00000197963 100 ntBASIC6.59□□□□□ -1.35
Rfx3P48381 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC6.59□□□□□ -1.35
Rfx3P48381 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC6.59□□□□□ -1.35
Rfx3P48381 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC6.59□□□□□ -1.35
Rfx3P48381 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC6.59□□□□□ -1.35
Rfx3P48381 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC6.59□□□□□ -1.35
Rfx3P48381 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC6.59□□□□□ -1.35
Rfx3P48381 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC6.59□□□□□ -1.35
Rfx3P48381 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.59□□□□□ -1.35
Rfx3P48381 Gm45782-201ENSMUST00000212670 366 ntBASIC6.59□□□□□ -1.35
Rfx3P48381 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 Gm45925-202ENSMUST00000219904 1136 ntBASIC6.59□□□□□ -1.35
Rfx3P48381 CT572999.1-201ENSMUST00000220315 1260 ntBASIC6.59□□□□□ -1.35
Rfx3P48381 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Rfx3P48381 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Rfx3P48381 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.59□□□□□ -1.35
Rfx3P48381 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.59□□□□□ -1.35
Rfx3P48381 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Rfx3P48381 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC6.59□□□□□ -1.35
Rfx3P48381 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Rfx3P48381 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Rfx3P48381 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx3P48381 Gm14035-201ENSMUST00000117596 1475 ntBASIC6.59□□□□□ -1.36
Rfx3P48381 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Rfx3P48381 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Rfx3P48381 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Rfx3P48381 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Rfx3P48381 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Rfx3P48381 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx3P48381 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Rfx3P48381 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx3P48381 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.58□□□□□ -1.36
Rfx3P48381 Gm26831-201ENSMUST00000181458 1380 ntBASIC6.58□□□□□ -1.36
Rfx3P48381 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx3P48381 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Rfx3P48381 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC6.58□□□□□ -1.36
Rfx3P48381 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Rfx3P48381 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx3P48381 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx3P48381 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Rfx3P48381 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC6.58□□□□□ -1.36
Rfx3P48381 Gm11954-201ENSMUST00000121403 349 ntBASIC6.58□□□□□ -1.36
Rfx3P48381 Gm15730-201ENSMUST00000121828 415 ntBASIC6.58□□□□□ -1.36
Rfx3P48381 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx3P48381 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC6.58□□□□□ -1.36
Rfx3P48381 Gm22262-201ENSMUST00000158713 86 ntBASIC6.58□□□□□ -1.36
Rfx3P48381 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rfx3P48381 Mir1231-201ENSMUST00000175639 81 ntBASIC6.58□□□□□ -1.36
Rfx3P48381 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Rfx3P48381 Gm21181-201ENSMUST00000186249 330 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms