Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 AC140930.1-201ENSMUST00000221889 389 ntBASIC9.57□□□□□ -0.88
Col18a1P39061 AC163651.1-201ENSMUST00000222500 372 ntBASIC9.57□□□□□ -0.88
Col18a1P39061 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Col18a1P39061 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Col18a1P39061 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col18a1P39061 Gm8995-202ENSMUST00000208417 3490 ntBASIC9.56□□□□□ -0.88
Col18a1P39061 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col18a1P39061 Cdc6-202ENSMUST00000093937 2559 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col18a1P39061 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Col18a1P39061 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC9.56□□□□□ -0.88
Col18a1P39061 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Col18a1P39061 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col18a1P39061 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Col18a1P39061 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col18a1P39061 Gm43864-201ENSMUST00000204452 4028 ntBASIC9.56□□□□□ -0.88
Col18a1P39061 Gm44117-201ENSMUST00000204442 1758 ntBASIC9.56□□□□□ -0.88
Col18a1P39061 5730455P16Rik-201ENSMUST00000103225 4554 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col18a1P39061 Gm14733-201ENSMUST00000117680 133 ntBASIC9.56□□□□□ -0.88
Col18a1P39061 Gm13983-201ENSMUST00000118018 865 ntBASIC9.56□□□□□ -0.88
Col18a1P39061 Gm22024-201ENSMUST00000122733 287 ntBASIC9.56□□□□□ -0.88
Col18a1P39061 Gm26346-201ENSMUST00000157525 329 ntBASIC9.56□□□□□ -0.88
Col18a1P39061 Gpatch2-206ENSMUST00000160471 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col18a1P39061 Gm7426-201ENSMUST00000179046 404 ntBASIC9.56□□□□□ -0.88
Col18a1P39061 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col18a1P39061 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col18a1P39061 AC126554.3-201ENSMUST00000223131 493 ntBASIC9.56□□□□□ -0.88
Col18a1P39061 AC132260.1-201ENSMUST00000225499 734 ntBASIC9.56□□□□□ -0.88
Col18a1P39061 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col18a1P39061 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Col18a1P39061 Phc1-201ENSMUST00000079560 3839 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col18a1P39061 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Col18a1P39061 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col18a1P39061 Ctnna2-201ENSMUST00000075340 2864 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Col18a1P39061 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col18a1P39061 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC9.56□□□□□ -0.88
Col18a1P39061 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col18a1P39061 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col18a1P39061 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
Col18a1P39061 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col18a1P39061 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Col18a1P39061 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col18a1P39061 Psmb11-201ENSMUST00000097177 4247 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Col18a1P39061 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col18a1P39061 Gm9226-201ENSMUST00000188352 3489 ntBASIC9.56□□□□□ -0.88
Col18a1P39061 Gm21152-201ENSMUST00000190271 3483 ntBASIC9.56□□□□□ -0.88
Col18a1P39061 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Col18a1P39061 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
Col18a1P39061 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col18a1P39061 Gm37785-201ENSMUST00000195783 2408 ntBASIC9.56□□□□□ -0.88
Col18a1P39061 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Gm43789-201ENSMUST00000199275 2472 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Gm15704-201ENSMUST00000144757 2818 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Epb42-202ENSMUST00000102490 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Gm11256-201ENSMUST00000118109 829 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC9.55□□□□□ -0.88
Col18a1P39061 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC9.55□□□□□ -0.88
Col18a1P39061 Mir3078-201ENSMUST00000175231 87 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC9.55□□□□□ -0.88
Col18a1P39061 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC9.55□□□□□ -0.88
Col18a1P39061 AC166358.9-201ENSMUST00000220653 375 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 Gm33312-201ENSMUST00000222443 332 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
Col18a1P39061 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Col18a1P39061 Sv2b-201ENSMUST00000085164 5307 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Gm15229-201ENSMUST00000146636 1398 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Col18a1P39061 Srgap1-202ENSMUST00000081688 7787 ntAPPRIS P3 TSL 5 BASIC9.55□□□□□ -0.88
Col18a1P39061 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Col18a1P39061 Lmx1a-202ENSMUST00000111377 3200 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Col18a1P39061 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Btrc-206ENSMUST00000224102 3037 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 Gm37043-201ENSMUST00000194609 3105 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Ap2b1-205ENSMUST00000176430 3596 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Col18a1P39061 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Col18a1P39061 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Gm8812-201ENSMUST00000118496 412 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 Gm13313-201ENSMUST00000118938 1084 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 Gm13333-201ENSMUST00000119424 781 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 Gm3810-201ENSMUST00000122413 476 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 Gm5970-201ENSMUST00000131638 1216 ntBASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms