Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Hmgb3O54879 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Hmgb3O54879 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Hmgb3O54879 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 AC139941.2-201ENSMUST00000221565 1824 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Hmgb3O54879 AC144772.2-201ENSMUST00000228830 2859 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm24335-201ENSMUST00000104211 132 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Rhox4c-201ENSMUST00000115183 903 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm12920-201ENSMUST00000121818 1186 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm14225-201ENSMUST00000142310 539 ntTSL 2 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Mir1968-201ENSMUST00000157429 68 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm24347-201ENSMUST00000158711 142 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm8167-201ENSMUST00000183320 958 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm27158-201ENSMUST00000183813 238 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm8307-201ENSMUST00000187682 1150 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm29041-201ENSMUST00000189199 380 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm29462-201ENSMUST00000191458 288 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm37371-201ENSMUST00000194837 392 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm42794-201ENSMUST00000197636 835 ntTSL 3 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm23927-202ENSMUST00000199928 216 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC5.88□□□□□ -1.47
Hmgb3O54879 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC5.88□□□□□ -1.47
Hmgb3O54879 AC154307.1-201ENSMUST00000214799 90 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 AC146596.1-201ENSMUST00000223507 223 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 AC163660.3-202ENSMUST00000224917 464 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Olfr890-201ENSMUST00000079804 945 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm44509-201ENSMUST00000205400 1324 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 AC123665.5-201ENSMUST00000226648 1392 ntBASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb3O54879 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Hmgb3O54879 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Hmgb3O54879 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm37968-201ENSMUST00000195131 3201 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm15950-201ENSMUST00000162902 1973 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm43023-201ENSMUST00000197583 2106 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 n-R5s51-201ENSMUST00000104473 123 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm14509-201ENSMUST00000117312 1286 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm12593-201ENSMUST00000120981 743 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm12464-201ENSMUST00000121385 1016 ntBASIC5.87□□□□□ -1.47
Hmgb3O54879 Gm11188-201ENSMUST00000122382 388 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms