Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm8061-201ENSMUST00000122380 350 ntBASIC7.47□□□□□ -1.21
Col4a6B1AVK5 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC7.47□□□□□ -1.21
Col4a6B1AVK5 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Col4a6B1AVK5 Gm38122-201ENSMUST00000192679 885 ntBASIC7.47□□□□□ -1.21
Col4a6B1AVK5 Ighv8-3-201ENSMUST00000194985 295 ntBASIC7.47□□□□□ -1.21
Col4a6B1AVK5 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC7.47□□□□□ -1.21
Col4a6B1AVK5 Gm44163-201ENSMUST00000205140 475 ntBASIC7.47□□□□□ -1.21
Col4a6B1AVK5 Gm18469-201ENSMUST00000208850 439 ntBASIC7.47□□□□□ -1.21
Col4a6B1AVK5 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC7.47□□□□□ -1.21
Col4a6B1AVK5 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC7.47□□□□□ -1.21
Col4a6B1AVK5 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC7.47□□□□□ -1.21
Col4a6B1AVK5 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC7.47□□□□□ -1.21
Col4a6B1AVK5 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Col4a6B1AVK5 Adgrg1-202ENSMUST00000179619 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col4a6B1AVK5 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col4a6B1AVK5 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Col4a6B1AVK5 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col4a6B1AVK5 Kcna2-201ENSMUST00000038695 11582 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col4a6B1AVK5 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7.46□□□□□ -1.21
Col4a6B1AVK5 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Col4a6B1AVK5 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
Col4a6B1AVK5 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC7.46□□□□□ -1.21
Col4a6B1AVK5 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Col4a6B1AVK5 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
Col4a6B1AVK5 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Col4a6B1AVK5 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Col4a6B1AVK5 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Col4a6B1AVK5 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
Col4a6B1AVK5 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Col4a6B1AVK5 AC155234.1-201ENSMUST00000225610 2823 ntBASIC7.46□□□□□ -1.21
Col4a6B1AVK5 Gm43336-201ENSMUST00000200487 4504 ntBASIC7.46□□□□□ -1.21
Col4a6B1AVK5 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Gm23903-201ENSMUST00000157566 131 ntBASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Mir7037-201ENSMUST00000184414 65 ntBASIC7.46□□□□□ -1.22
Col4a6B1AVK5 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Gm44091-201ENSMUST00000205212 649 ntBASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Gm44566-201ENSMUST00000207638 304 ntBASIC7.46□□□□□ -1.22
Col4a6B1AVK5 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 AC158750.1-201ENSMUST00000226163 634 ntBASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Col28a1-201ENSMUST00000115537 4230 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Abcc3-206ENSMUST00000178136 5005 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Gm37161-201ENSMUST00000191994 2697 ntBASIC7.46□□□□□ -1.22
Col4a6B1AVK5 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Klf10-202ENSMUST00000226363 2917 ntBASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Gm16057-201ENSMUST00000120811 759 ntBASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Gm15242-201ENSMUST00000122459 283 ntBASIC7.45□□□□□ -1.22
Col4a6B1AVK5 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Gm44342-201ENSMUST00000196874 129 ntBASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Gm44383-201ENSMUST00000198940 129 ntBASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Gm42584-201ENSMUST00000201404 220 ntBASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Gm45626-201ENSMUST00000210093 361 ntBASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Gm34424-201ENSMUST00000213400 782 ntBASIC7.45□□□□□ -1.22
Col4a6B1AVK5 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 AC126554.3-201ENSMUST00000223131 493 ntBASIC7.45□□□□□ -1.22
Col4a6B1AVK5 AC154642.1-201ENSMUST00000224173 740 ntBASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Zic4-201ENSMUST00000066384 3891 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Gm37109-201ENSMUST00000195475 2254 ntBASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Col4a6B1AVK5 AC159264.1-202ENSMUST00000224856 3162 ntBASIC7.45□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms