Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Gm14938-201ENSMUST00000119482 943 ntBASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Gm25574-201ENSMUST00000175245 249 ntBASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Gm42462-201ENSMUST00000196543 1363 ntBASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Gm6494-201ENSMUST00000218604 2298 ntBASIC7.13□□□□□ -1.27
Cdh23Q99PF4 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Gm24451-201ENSMUST00000083353 133 ntBASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Dalir-201ENSMUST00000188773 2170 ntBASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Gm44117-201ENSMUST00000204442 1758 ntBASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.13□□□□□ -1.27
Cdh23Q99PF4 AC158388.2-201ENSMUST00000223665 1314 ntBASIC7.13□□□□□ -1.27
Cdh23Q99PF4 Cga-202ENSMUST00000108130 609 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Gm24756-201ENSMUST00000177002 96 ntBASIC7.12□□□□□ -1.27
Cdh23Q99PF4 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Gm37463-201ENSMUST00000193819 796 ntBASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Gm44911-201ENSMUST00000208436 1062 ntBASIC7.12□□□□□ -1.27
Cdh23Q99PF4 AC154324.1-201ENSMUST00000226711 814 ntBASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Gm8177-201ENSMUST00000181591 1336 ntBASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Gm18700-201ENSMUST00000185791 553 ntBASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Gm7343-201ENSMUST00000194510 1061 ntBASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Gm8929-201ENSMUST00000197781 1132 ntBASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Cdk12-201ENSMUST00000003203 4837 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Trav8-2-201ENSMUST00000130122 337 ntBASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC7.12□□□□□ -1.27
Cdh23Q99PF4 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 AC165292.1-201ENSMUST00000215218 620 ntBASIC7.12□□□□□ -1.27
Cdh23Q99PF4 AC164424.3-201ENSMUST00000220809 148 ntBASIC7.12□□□□□ -1.27
Cdh23Q99PF4 AC166358.8-201ENSMUST00000223288 105 ntBASIC7.12□□□□□ -1.27
Cdh23Q99PF4 AC124739.1-201ENSMUST00000223433 148 ntBASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Olfr449-201ENSMUST00000050729 1037 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Slco1b2-204ENSMUST00000203597 1965 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Gm43429-201ENSMUST00000197889 2251 ntBASIC7.12□□□□□ -1.27
Cdh23Q99PF4 Gm18796-201ENSMUST00000190440 1767 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms