Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 C79130-201ENSMUST00000199610 4296 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Nt5c1b-217ENSMUST00000219826 2023 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Hk1-203ENSMUST00000116238 3851 ntAPPRIS P4 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 L3mbtl2-201ENSMUST00000023029 3487 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 AC154355.1-201ENSMUST00000224604 2162 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm24195-201ENSMUST00000116804 137 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm15779-201ENSMUST00000117470 412 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm12851-201ENSMUST00000117920 421 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm13359-201ENSMUST00000119000 695 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm13921-201ENSMUST00000119411 463 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm11955-201ENSMUST00000119801 470 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm13586-201ENSMUST00000121784 464 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm26424-201ENSMUST00000122530 104 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm9359-201ENSMUST00000163721 1221 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm7991-201ENSMUST00000168668 591 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm21909-201ENSMUST00000178260 439 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm27025-201ENSMUST00000182392 942 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm20111-201ENSMUST00000184830 319 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm20819-201ENSMUST00000191091 925 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Ighv8-15-201ENSMUST00000197770 294 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm43840-201ENSMUST00000199444 484 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm42976-201ENSMUST00000200313 222 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm43629-201ENSMUST00000201782 704 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm43004-201ENSMUST00000201872 703 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm44181-201ENSMUST00000203106 483 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm44282-201ENSMUST00000203199 190 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm21054-201ENSMUST00000203981 380 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm18215-201ENSMUST00000204429 798 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 AC124510.2-201ENSMUST00000221958 683 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Zfat-202ENSMUST00000160248 3866 ntAPPRIS P4 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Alkbh1-209ENSMUST00000162961 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 AC154552.6-201ENSMUST00000221365 1342 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gatb-204ENSMUST00000127348 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Mapk6-202ENSMUST00000168937 4089 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gem-201ENSMUST00000029868 1994 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Fmnl1-203ENSMUST00000107027 3693 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Ripor2-203ENSMUST00000091694 3142 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Def8-205ENSMUST00000108832 3242 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Def8-201ENSMUST00000001522 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm28670-201ENSMUST00000185365 1498 ntTSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm29537-202ENSMUST00000186153 1498 ntTSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm29497-201ENSMUST00000186801 1498 ntTSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm28568-201ENSMUST00000187762 1498 ntTSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm29445-202ENSMUST00000189947 1497 ntTSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm28458-202ENSMUST00000190542 1497 ntTSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm28457-202ENSMUST00000191277 1498 ntTSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm37654-201ENSMUST00000193019 1498 ntTSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Ap1s3-203ENSMUST00000162342 2876 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Clp1Q99LI9 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Clp1Q99LI9 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Clp1Q99LI9 Tmem174-201ENSMUST00000050389 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Clp1Q99LI9 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Clp1Q99LI9 4930534H03Rik-201ENSMUST00000216311 1669 ntTSL 5 BASIC8.43□□□□□ -1.06
Clp1Q99LI9 Map4k4-213ENSMUST00000193682 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Clp1Q99LI9 Camk2a-201ENSMUST00000025519 3244 ntTSL 5 BASIC8.43□□□□□ -1.06
Clp1Q99LI9 Olfr429-202ENSMUST00000216346 2510 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
Clp1Q99LI9 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms