Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cchcr1Q8K2I2 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Gm23701-201ENSMUST00000103893 110 ntBASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Gm14645-201ENSMUST00000118597 417 ntBASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Gm25082-201ENSMUST00000177296 255 ntBASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Gm27018-201ENSMUST00000181136 225 ntBASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Mir6922-201ENSMUST00000185099 66 ntBASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Gm29195-201ENSMUST00000189038 379 ntBASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Gm29977-201ENSMUST00000206804 724 ntBASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Gm45478-201ENSMUST00000209472 211 ntBASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Gm9231-201ENSMUST00000220817 1009 ntBASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 AC166822.1-201ENSMUST00000227667 636 ntBASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 CT025639.1-201ENSMUST00000223906 1375 ntBASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cchcr1Q8K2I2 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 AC123705.1-201ENSMUST00000222512 2058 ntBASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Gm11320-201ENSMUST00000119434 463 ntBASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Mir199b-201ENSMUST00000175066 110 ntBASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Gm5920-201ENSMUST00000187390 853 ntBASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Gm37349-201ENSMUST00000194205 624 ntBASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 AC160635.1-201ENSMUST00000216731 474 ntBASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 CT009556.3-201ENSMUST00000226173 513 ntBASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 AC158981.1-201ENSMUST00000226943 1205 ntBASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 AC125539.1-201ENSMUST00000227423 622 ntBASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Gm5815-201ENSMUST00000050706 1185 ntBASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Gm4953-201ENSMUST00000077309 483 ntBASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Gm24924-201ENSMUST00000084007 164 ntBASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Gm43314-201ENSMUST00000196744 2231 ntBASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Cchcr1Q8K2I2 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cchcr1Q8K2I2 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cchcr1Q8K2I2 Gm44916-201ENSMUST00000208664 2194 ntBASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms