Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm22470-201ENSMUST00000104117 130 ntBASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm13622-201ENSMUST00000120658 433 ntBASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm12459-201ENSMUST00000120659 356 ntBASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm27001-201ENSMUST00000182252 936 ntBASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Mir6340-201ENSMUST00000183857 119 ntBASIC8.64□□□□□ -1.03
Vps53Q8CCB4 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm19764-201ENSMUST00000203630 649 ntBASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm44722-201ENSMUST00000206473 436 ntBASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 AL837512.1-201ENSMUST00000223914 1073 ntBASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 AC124421.1-201ENSMUST00000219114 4154 ntBASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 AC124414.1-201ENSMUST00000218033 2946 ntBASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm6493-201ENSMUST00000159889 1786 ntBASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Gm45537-201ENSMUST00000211539 2708 ntBASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Gm11474-201ENSMUST00000120814 277 ntBASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Gm24139-201ENSMUST00000122780 288 ntBASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Gm24442-201ENSMUST00000157238 327 ntBASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Gm7991-201ENSMUST00000168668 591 ntBASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Gm6536-201ENSMUST00000171180 615 ntBASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Gm21839-201ENSMUST00000179536 378 ntBASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Gm9423-201ENSMUST00000183173 997 ntBASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Gm30646-201ENSMUST00000207662 180 ntBASIC8.63□□□□□ -1.03
Vps53Q8CCB4 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.63□□□□□ -1.03
Vps53Q8CCB4 CT010472.1-201ENSMUST00000224000 704 ntBASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Gm43961-201ENSMUST00000203289 1872 ntBASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Gm13106-201ENSMUST00000119045 1443 ntBASIC8.63□□□□□ -1.03
Vps53Q8CCB4 Gm14849-201ENSMUST00000122293 2846 ntBASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Npr3-204ENSMUST00000228489 1969 ntBASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Gm11865-201ENSMUST00000118093 859 ntBASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Gm11945-201ENSMUST00000120551 476 ntBASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Gm13828-201ENSMUST00000122278 363 ntBASIC8.62□□□□□ -1.03
Vps53Q8CCB4 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Gm6838-201ENSMUST00000172851 582 ntBASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Gm17973-201ENSMUST00000174509 520 ntBASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Gm7763-201ENSMUST00000182220 1006 ntBASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Gm43387-201ENSMUST00000196896 1066 ntBASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Ighv8-15-201ENSMUST00000197770 294 ntBASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC8.62□□□□□ -1.03
Vps53Q8CCB4 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 105.1 ms