Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc88cQ6VGS5 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc88cQ6VGS5 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc88cQ6VGS5 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC8.06□□□□□ -1.12
Ccdc88cQ6VGS5 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC8.06□□□□□ -1.12
Ccdc88cQ6VGS5 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm2065-201ENSMUST00000194697 2757 ntBASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm13878-201ENSMUST00000117986 577 ntBASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm11889-201ENSMUST00000118402 1079 ntBASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm16284-201ENSMUST00000140995 400 ntBASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm43906-201ENSMUST00000203194 906 ntBASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm2398-201ENSMUST00000218347 883 ntBASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 AL591207.2-201ENSMUST00000222991 337 ntBASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 AC154515.3-201ENSMUST00000225081 1159 ntBASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm37648-201ENSMUST00000192072 2563 ntBASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm14035-201ENSMUST00000117596 1475 ntBASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm25178-201ENSMUST00000122633 325 ntBASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm27156-201ENSMUST00000184589 754 ntBASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm43656-201ENSMUST00000197882 434 ntBASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm45509-201ENSMUST00000209624 1229 ntBASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm9604-201ENSMUST00000211175 433 ntBASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm24411-201ENSMUST00000083428 131 ntBASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Ccdc88cQ6VGS5 Gm37785-201ENSMUST00000195783 2408 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Gm37465-201ENSMUST00000192845 3290 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Gm42648-201ENSMUST00000200774 2505 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Gm22671-201ENSMUST00000104420 134 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Gm17170-201ENSMUST00000112785 316 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Gm7821-201ENSMUST00000117111 788 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Gm6142-201ENSMUST00000120290 325 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Gm13221-201ENSMUST00000121712 430 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Gm12920-201ENSMUST00000121818 1186 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Gm8577-201ENSMUST00000122420 986 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Gm20690-201ENSMUST00000177341 315 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Gm27018-201ENSMUST00000181136 225 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Mir7212-201ENSMUST00000184098 61 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Gm37328-201ENSMUST00000193191 640 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Gm9419-201ENSMUST00000200672 567 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms