Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Pde10a-201ENSMUST00000024647 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Rif1Q6PR54 Ovol1-201ENSMUST00000025861 2900 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Rif1Q6PR54 AC121870.2-201ENSMUST00000214343 1870 ntBASIC6.34□□□□□ -1.39
Rif1Q6PR54 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Rif1Q6PR54 Ces1e-201ENSMUST00000034173 2073 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Rif1Q6PR54 Gm7265-201ENSMUST00000192735 3502 ntBASIC6.34□□□□□ -1.39
Rif1Q6PR54 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Rif1Q6PR54 Tmcc3-202ENSMUST00000117460 3217 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Rif1Q6PR54 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Rif1Q6PR54 Wdr59-203ENSMUST00000211981 3618 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Rif1Q6PR54 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.34□□□□□ -1.39
Rif1Q6PR54 Gm28906-201ENSMUST00000191371 1779 ntBASIC6.34□□□□□ -1.39
Rif1Q6PR54 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Rif1Q6PR54 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Rif1Q6PR54 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Rif1Q6PR54 Emc1-205ENSMUST00000179784 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Rif1Q6PR54 Dclre1b-202ENSMUST00000063502 4113 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Rif1Q6PR54 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Rif1Q6PR54 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Rif1Q6PR54 Gm22256-201ENSMUST00000102291 107 ntBASIC6.34□□□□□ -1.4
Rif1Q6PR54 Olfr639-201ENSMUST00000106862 1020 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
Rif1Q6PR54 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
Rif1Q6PR54 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
Rif1Q6PR54 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.34□□□□□ -1.4
Rif1Q6PR54 Gm13357-201ENSMUST00000120528 537 ntBASIC6.34□□□□□ -1.4
Rif1Q6PR54 Gm13828-201ENSMUST00000122278 363 ntBASIC6.34□□□□□ -1.4
Rif1Q6PR54 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC6.34□□□□□ -1.4
Rif1Q6PR54 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Rif1Q6PR54 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Rif1Q6PR54 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC6.34□□□□□ -1.4
Rif1Q6PR54 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.34□□□□□ -1.4
Rif1Q6PR54 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC6.34□□□□□ -1.4
Rif1Q6PR54 1700113B19Rik-201ENSMUST00000191817 420 ntBASIC6.34□□□□□ -1.4
Rif1Q6PR54 Gm7341-201ENSMUST00000192183 926 ntBASIC6.34□□□□□ -1.4
Rif1Q6PR54 Gm20072-201ENSMUST00000202231 292 ntBASIC6.34□□□□□ -1.4
Rif1Q6PR54 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.34□□□□□ -1.4
Rif1Q6PR54 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Rif1Q6PR54 Nsun3-201ENSMUST00000063089 3813 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Rif1Q6PR54 Tbx22-203ENSMUST00000168174 5217 ntAPPRIS P4 TSL 2 BASIC6.34□□□□□ -1.4
Rif1Q6PR54 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Rif1Q6PR54 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Creb1-202ENSMUST00000087366 8364 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Gm28187-201ENSMUST00000186885 2134 ntBASIC6.33□□□□□ -1.4
Rif1Q6PR54 Pln-202ENSMUST00000163319 1715 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Rif1Q6PR54 AC124421.1-201ENSMUST00000219114 4154 ntBASIC6.33□□□□□ -1.4
Rif1Q6PR54 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.33□□□□□ -1.4
Rif1Q6PR54 Gm16465-201ENSMUST00000118585 1758 ntBASIC6.33□□□□□ -1.4
Rif1Q6PR54 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Cndp1-201ENSMUST00000070139 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Tex9-201ENSMUST00000085358 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 1700006J14Rik-203ENSMUST00000160091 2629 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Gm23311-201ENSMUST00000104152 134 ntBASIC6.33□□□□□ -1.4
Rif1Q6PR54 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Gm12925-201ENSMUST00000130791 678 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.33□□□□□ -1.4
Rif1Q6PR54 Gm8305-201ENSMUST00000180022 1195 ntBASIC6.33□□□□□ -1.4
Rif1Q6PR54 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.33□□□□□ -1.4
Rif1Q6PR54 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.33□□□□□ -1.4
Rif1Q6PR54 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.33□□□□□ -1.4
Rif1Q6PR54 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.33□□□□□ -1.4
Rif1Q6PR54 AC154757.2-201ENSMUST00000228885 743 ntBASIC6.33□□□□□ -1.4
Rif1Q6PR54 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Rnf141-204ENSMUST00000175981 2333 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Gm37080-201ENSMUST00000194804 2404 ntBASIC6.33□□□□□ -1.4
Rif1Q6PR54 Olfr117-203ENSMUST00000215414 3498 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Dync1i2-207ENSMUST00000112142 2585 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Gm38249-201ENSMUST00000192560 2321 ntBASIC6.33□□□□□ -1.4
Rif1Q6PR54 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Gm16050-201ENSMUST00000160626 2363 ntTSL 3 BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rif1Q6PR54 Gm14388-201ENSMUST00000118119 477 ntBASIC6.33□□□□□ -1.4
Rif1Q6PR54 Gm11928-201ENSMUST00000119323 437 ntBASIC6.33□□□□□ -1.4
Rif1Q6PR54 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms