Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC8.42□□□□□ -1.06
Hmgb1P63158 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC8.42□□□□□ -1.06
Hmgb1P63158 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC8.42□□□□□ -1.06
Hmgb1P63158 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 Gm22224-201ENSMUST00000157357 93 ntBASIC8.42□□□□□ -1.06
Hmgb1P63158 Gm22811-201ENSMUST00000157468 154 ntBASIC8.42□□□□□ -1.06
Hmgb1P63158 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC8.42□□□□□ -1.06
Hmgb1P63158 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC8.42□□□□□ -1.06
Hmgb1P63158 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC8.42□□□□□ -1.06
Hmgb1P63158 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC8.42□□□□□ -1.06
Hmgb1P63158 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC8.42□□□□□ -1.06
Hmgb1P63158 Gm28677-202ENSMUST00000186904 615 ntBASIC8.42□□□□□ -1.06
Hmgb1P63158 Gm6799-201ENSMUST00000186919 573 ntBASIC8.42□□□□□ -1.06
Hmgb1P63158 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC8.42□□□□□ -1.06
Hmgb1P63158 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC8.42□□□□□ -1.06
Hmgb1P63158 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC8.42□□□□□ -1.06
Hmgb1P63158 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC8.42□□□□□ -1.06
Hmgb1P63158 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC8.42□□□□□ -1.06
Hmgb1P63158 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC8.42□□□□□ -1.06
Hmgb1P63158 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC8.42□□□□□ -1.06
Hmgb1P63158 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC8.42□□□□□ -1.06
Hmgb1P63158 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC8.42□□□□□ -1.06
Hmgb1P63158 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC8.42□□□□□ -1.06
Hmgb1P63158 Gm21321-201ENSMUST00000220179 446 ntBASIC8.42□□□□□ -1.06
Hmgb1P63158 AC122539.2-201ENSMUST00000220207 404 ntBASIC8.42□□□□□ -1.06
Hmgb1P63158 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC8.42□□□□□ -1.06
Hmgb1P63158 Gm11360-201ENSMUST00000221898 262 ntBASIC8.42□□□□□ -1.06
Hmgb1P63158 CT030194.2-201ENSMUST00000225752 379 ntBASIC8.42□□□□□ -1.06
Hmgb1P63158 AC124715.2-201ENSMUST00000226762 617 ntBASIC8.42□□□□□ -1.06
Hmgb1P63158 Gm10145-201ENSMUST00000077776 462 ntBASIC8.42□□□□□ -1.06
Hmgb1P63158 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Hmgb1P63158 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 Gm6011-201ENSMUST00000211736 1796 ntBASIC8.42□□□□□ -1.06
Hmgb1P63158 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Hmgb1P63158 Gm37968-201ENSMUST00000195131 3201 ntBASIC8.42□□□□□ -1.06
Hmgb1P63158 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hmgb1P63158 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hmgb1P63158 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Hmgb1P63158 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Hmgb1P63158 AC154642.2-201ENSMUST00000223657 2485 ntBASIC8.41□□□□□ -1.06
Hmgb1P63158 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Hmgb1P63158 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Hmgb1P63158 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Hmgb1P63158 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Hmgb1P63158 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm17083-201ENSMUST00000165849 1366 ntBASIC8.41□□□□□ -1.06
Hmgb1P63158 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.41□□□□□ -1.06
Hmgb1P63158 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hmgb1P63158 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC8.41□□□□□ -1.06
Hmgb1P63158 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm5915-201ENSMUST00000116136 454 ntBASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm11622-201ENSMUST00000120525 691 ntBASIC8.41□□□□□ -1.06
Hmgb1P63158 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm25320-201ENSMUST00000122551 324 ntBASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC8.41□□□□□ -1.06
Hmgb1P63158 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hmgb1P63158 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC8.41□□□□□ -1.06
Hmgb1P63158 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC8.41□□□□□ -1.06
Hmgb1P63158 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm42782-201ENSMUST00000197286 522 ntBASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm2142-201ENSMUST00000197899 589 ntBASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm44213-201ENSMUST00000204977 703 ntBASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm8291-201ENSMUST00000209635 1261 ntBASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm4977-201ENSMUST00000215709 1262 ntBASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm9249-201ENSMUST00000221420 578 ntBASIC8.41□□□□□ -1.06
Hmgb1P63158 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hmgb1P63158 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hmgb1P63158 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
Hmgb1P63158 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Hmgb1P63158 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm43395-201ENSMUST00000198717 2240 ntBASIC8.41□□□□□ -1.06
Hmgb1P63158 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC8.41□□□□□ -1.06
Hmgb1P63158 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Hmgb1P63158 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hmgb1P63158 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Hmgb1P63158 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Hmgb1P63158 Gm42514-201ENSMUST00000196636 1832 ntBASIC8.4□□□□□ -1.06
Hmgb1P63158 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Hmgb1P63158 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Hmgb1P63158 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms