Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC9.31□□□□□ -0.92
Msh6P54276 Gm18960-201ENSMUST00000222962 713 ntBASIC9.31□□□□□ -0.92
Msh6P54276 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Msh6P54276 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Msh6P54276 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
Msh6P54276 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Msh6P54276 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Msh6P54276 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC9.31□□□□□ -0.92
Msh6P54276 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Msh6P54276 Gm43429-201ENSMUST00000197889 2251 ntBASIC9.31□□□□□ -0.92
Msh6P54276 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Msh6P54276 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC9.31□□□□□ -0.92
Msh6P54276 AC166574.1-201ENSMUST00000226916 1309 ntBASIC9.31□□□□□ -0.92
Msh6P54276 Gm5841-201ENSMUST00000195307 2177 ntBASIC9.31□□□□□ -0.92
Msh6P54276 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Msh6P54276 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Msh6P54276 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Msh6P54276 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Msh6P54276 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Msh6P54276 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Msh6P54276 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Msh6P54276 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Msh6P54276 Gm7690-201ENSMUST00000190885 1399 ntBASIC9.3□□□□□ -0.92
Msh6P54276 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Msh6P54276 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Msh6P54276 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Msh6P54276 Gm11889-201ENSMUST00000118402 1079 ntBASIC9.3□□□□□ -0.92
Msh6P54276 Gm14847-201ENSMUST00000121978 519 ntBASIC9.3□□□□□ -0.92
Msh6P54276 Gm17022-201ENSMUST00000166415 922 ntBASIC9.3□□□□□ -0.92
Msh6P54276 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Msh6P54276 Gm24812-201ENSMUST00000175315 284 ntBASIC9.3□□□□□ -0.92
Msh6P54276 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC9.3□□□□□ -0.92
Msh6P54276 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Msh6P54276 AC091237.1-201ENSMUST00000224911 637 ntBASIC9.3□□□□□ -0.92
Msh6P54276 AC156574.1-201ENSMUST00000227084 452 ntBASIC9.3□□□□□ -0.92
Msh6P54276 n-R5s169-201ENSMUST00000083110 120 ntBASIC9.3□□□□□ -0.92
Msh6P54276 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Msh6P54276 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Msh6P54276 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Msh6P54276 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Msh6P54276 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC9.3□□□□□ -0.92
Msh6P54276 Gm37043-201ENSMUST00000194609 3105 ntBASIC9.3□□□□□ -0.92
Msh6P54276 Gm44769-201ENSMUST00000206120 2809 ntBASIC9.3□□□□□ -0.92
Msh6P54276 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Msh6P54276 Gm43970-201ENSMUST00000204346 3605 ntBASIC9.3□□□□□ -0.92
Msh6P54276 Gm43168-201ENSMUST00000201039 1612 ntBASIC9.3□□□□□ -0.92
Msh6P54276 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Msh6P54276 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Msh6P54276 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Msh6P54276 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Msh6P54276 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Msh6P54276 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Msh6P54276 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Msh6P54276 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Msh6P54276 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Msh6P54276 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Msh6P54276 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Msh6P54276 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Msh6P54276 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Msh6P54276 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Msh6P54276 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Msh6P54276 Gm6987-201ENSMUST00000119319 428 ntBASIC9.29□□□□□ -0.92
Msh6P54276 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC9.29□□□□□ -0.92
Msh6P54276 Gm21614-201ENSMUST00000183260 1005 ntBASIC9.29□□□□□ -0.92
Msh6P54276 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC9.29□□□□□ -0.92
Msh6P54276 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC9.29□□□□□ -0.92
Msh6P54276 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC9.29□□□□□ -0.92
Msh6P54276 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Msh6P54276 Gm35108-201ENSMUST00000194321 699 ntBASIC9.29□□□□□ -0.92
Msh6P54276 Gm33191-201ENSMUST00000195604 699 ntBASIC9.29□□□□□ -0.92
Msh6P54276 Gm42708-201ENSMUST00000196332 905 ntBASIC9.29□□□□□ -0.92
Msh6P54276 Gm17822-201ENSMUST00000204307 351 ntBASIC9.29□□□□□ -0.92
Msh6P54276 Gm43905-201ENSMUST00000204516 204 ntBASIC9.29□□□□□ -0.92
Msh6P54276 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Msh6P54276 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Msh6P54276 AC124489.3-201ENSMUST00000224037 278 ntBASIC9.29□□□□□ -0.92
Msh6P54276 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
Msh6P54276 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Msh6P54276 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Msh6P54276 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Msh6P54276 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Msh6P54276 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Msh6P54276 Gm37663-201ENSMUST00000191887 2299 ntBASIC9.29□□□□□ -0.92
Msh6P54276 Gm37520-201ENSMUST00000194883 2672 ntBASIC9.29□□□□□ -0.92
Msh6P54276 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Msh6P54276 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Msh6P54276 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Msh6P54276 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
Msh6P54276 Gm9585-201ENSMUST00000219681 1404 ntBASIC9.28□□□□□ -0.92
Msh6P54276 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Msh6P54276 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Msh6P54276 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC9.28□□□□□ -0.92
Msh6P54276 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Msh6P54276 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC9.28□□□□□ -0.92
Msh6P54276 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC9.28□□□□□ -0.92
Msh6P54276 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Msh6P54276 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Msh6P54276 Gm8722-201ENSMUST00000121466 769 ntBASIC9.28□□□□□ -0.92
Msh6P54276 Gm12175-201ENSMUST00000122081 345 ntBASIC9.28□□□□□ -0.92
Msh6P54276 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms