Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Sox1P53783 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Sox1P53783 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sox1P53783 Snhg14-206ENSMUST00000187666 2517 ntTSL 5 BASIC8.11□□□□□ -1.11
Sox1P53783 Gm45292-201ENSMUST00000211232 2207 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Mterf1a-201ENSMUST00000044746 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sox1P53783 2600014E21Rik-201ENSMUST00000186411 4805 ntTSL 5 BASIC8.11□□□□□ -1.11
Sox1P53783 Gm19801-201ENSMUST00000218231 1882 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sox1P53783 Gm7869-201ENSMUST00000121457 1322 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sox1P53783 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sox1P53783 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Sox1P53783 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
Sox1P53783 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Sox1P53783 Fgf13-202ENSMUST00000119306 2091 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Sox1P53783 Gm37091-201ENSMUST00000195455 2087 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sox1P53783 Gm44986-201ENSMUST00000206292 2829 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Bdnf-206ENSMUST00000111046 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sox1P53783 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Gm8569-201ENSMUST00000117630 647 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Gm13240-201ENSMUST00000120042 565 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Gm12451-201ENSMUST00000121636 633 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC8.11□□□□□ -1.11
Sox1P53783 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC8.11□□□□□ -1.11
Sox1P53783 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC8.11□□□□□ -1.11
Sox1P53783 Gm16558-201ENSMUST00000163015 532 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Gm6838-201ENSMUST00000172851 582 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Gm25640-201ENSMUST00000175378 125 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Gm27155-201ENSMUST00000183716 898 ntBASIC8.11□□□□□ -1.11
Sox1P53783 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC8.11□□□□□ -1.11
Sox1P53783 Gm29513-201ENSMUST00000185741 202 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC8.11□□□□□ -1.11
Sox1P53783 Gm28688-201ENSMUST00000187301 268 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Ly6a-205ENSMUST00000189068 878 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Sox1P53783 Gm5511-201ENSMUST00000189380 802 ntBASIC8.11□□□□□ -1.11
Sox1P53783 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Sox1P53783 Gm37187-201ENSMUST00000193425 341 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Gm42605-201ENSMUST00000199565 385 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC8.11□□□□□ -1.11
Sox1P53783 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sox1P53783 Gm44227-201ENSMUST00000203576 241 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Gm44267-201ENSMUST00000204132 385 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Zg16-202ENSMUST00000205424 682 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Sox1P53783 Gm45185-201ENSMUST00000207556 404 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Gm45247-201ENSMUST00000210757 309 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC8.11□□□□□ -1.11
Sox1P53783 AC192616.3-201ENSMUST00000220797 1124 ntBASIC8.11□□□□□ -1.11
Sox1P53783 AC099629.1-201ENSMUST00000226778 464 ntBASIC8.11□□□□□ -1.11
Sox1P53783 CT030238.3-201ENSMUST00000227352 875 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Sox1P53783 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sox1P53783 Olfr980-201ENSMUST00000073932 933 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Sox1P53783 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Sox1P53783 Gm24036-201ENSMUST00000082868 156 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC8.11□□□□□ -1.11
Sox1P53783 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sox1P53783 Gm10704-201ENSMUST00000098952 730 ntBASIC8.11□□□□□ -1.11
Sox1P53783 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sox1P53783 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Sox1P53783 Lias-201ENSMUST00000031101 2996 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Sox1P53783 Slco1b2-204ENSMUST00000203597 1965 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Sox1P53783 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Sox1P53783 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sox1P53783 Ap2b1-205ENSMUST00000176430 3596 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Sox1P53783 Olfr467-202ENSMUST00000208563 1852 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Sox1P53783 Ces1e-201ENSMUST00000034173 2073 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Zfp607a-201ENSMUST00000053722 2061 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Sox1P53783 Pabpc6-201ENSMUST00000057190 3208 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Sox1P53783 Slco2b1-203ENSMUST00000107088 4369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Gm17083-201ENSMUST00000165849 1366 ntBASIC8.1□□□□□ -1.11
Sox1P53783 AC117608.2-201ENSMUST00000224124 1363 ntBASIC8.1□□□□□ -1.11
Sox1P53783 Hmgcr-209ENSMUST00000170287 2981 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 AC159196.3-201ENSMUST00000224307 1841 ntBASIC8.1□□□□□ -1.11
Sox1P53783 Pkd2l2-201ENSMUST00000014647 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Gm37303-201ENSMUST00000194202 1559 ntBASIC8.1□□□□□ -1.11
Sox1P53783 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Dpf3-207ENSMUST00000178756 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Gm44752-201ENSMUST00000207140 3305 ntBASIC8.1□□□□□ -1.11
Sox1P53783 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Sox1P53783 Pnpla1os-201ENSMUST00000146779 3946 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Pygb-201ENSMUST00000045441 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC8.1□□□□□ -1.11
Sox1P53783 Pcdhb15-201ENSMUST00000050034 2801 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Sox1P53783 Gpbp1-201ENSMUST00000047627 3694 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Elovl4-201ENSMUST00000034796 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Gm42847-201ENSMUST00000201732 2553 ntBASIC8.1□□□□□ -1.11
Sox1P53783 Cse1l-201ENSMUST00000002790 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Gm12851-201ENSMUST00000117920 421 ntBASIC8.1□□□□□ -1.11
Sox1P53783 Gm14353-201ENSMUST00000122200 869 ntBASIC8.1□□□□□ -1.11
Sox1P53783 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC8.1□□□□□ -1.11
Sox1P53783 Gm24925-201ENSMUST00000178157 107 ntBASIC8.1□□□□□ -1.11
Sox1P53783 Gm2877-201ENSMUST00000178248 1204 ntBASIC8.1□□□□□ -1.11
Sox1P53783 Gm8324-201ENSMUST00000178911 1204 ntBASIC8.1□□□□□ -1.11
Sox1P53783 Gm21614-201ENSMUST00000183260 1005 ntBASIC8.1□□□□□ -1.11
Sox1P53783 Mir8105-201ENSMUST00000184718 89 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms