Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC9.15□□□□□ -0.94
Rfx1P48377 Gm10182-201ENSMUST00000178676 273 ntBASIC9.15□□□□□ -0.94
Rfx1P48377 Zfp493-203ENSMUST00000181319 730 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rfx1P48377 Gm5835-201ENSMUST00000185806 1270 ntBASIC9.15□□□□□ -0.94
Rfx1P48377 Olfr10-201ENSMUST00000187570 942 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Rfx1P48377 Olfr1392-201ENSMUST00000189851 1018 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Rfx1P48377 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rfx1P48377 Gm45155-201ENSMUST00000207365 596 ntTSL 2 BASIC9.15□□□□□ -0.94
Rfx1P48377 Gm4120-201ENSMUST00000220456 578 ntBASIC9.15□□□□□ -0.94
Rfx1P48377 AC154450.1-201ENSMUST00000220911 485 ntBASIC9.15□□□□□ -0.94
Rfx1P48377 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC9.15□□□□□ -0.94
Rfx1P48377 AC146601.1-201ENSMUST00000227910 905 ntBASIC9.15□□□□□ -0.94
Rfx1P48377 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rfx1P48377 Gm6083-201ENSMUST00000075518 357 ntBASIC9.15□□□□□ -0.94
Rfx1P48377 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Rfx1P48377 Snora57-201ENSMUST00000093658 148 ntBASIC9.15□□□□□ -0.94
Rfx1P48377 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Rfx1P48377 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Rfx1P48377 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Rfx1P48377 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rfx1P48377 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC9.15□□□□□ -0.94
Rfx1P48377 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.94
Rfx1P48377 Gm37077-201ENSMUST00000195723 3691 ntBASIC9.15□□□□□ -0.94
Rfx1P48377 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC9.15□□□□□ -0.94
Rfx1P48377 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rfx1P48377 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rfx1P48377 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC9.15□□□□□ -0.95
Rfx1P48377 AC122878.1-201ENSMUST00000227716 1460 ntBASIC9.15□□□□□ -0.95
Rfx1P48377 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rfx1P48377 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Rfx1P48377 Gm37114-201ENSMUST00000195065 1804 ntBASIC9.15□□□□□ -0.95
Rfx1P48377 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 AC159264.1-201ENSMUST00000224844 4257 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC9.14□□□□□ -0.95
Rfx1P48377 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
Rfx1P48377 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC9.14□□□□□ -0.95
Rfx1P48377 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 Mir704-201ENSMUST00000102106 77 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 Ighv2-4-201ENSMUST00000103447 350 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Rfx1P48377 Gm8688-201ENSMUST00000118240 969 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC9.14□□□□□ -0.95
Rfx1P48377 Gm13872-203ENSMUST00000147082 657 ntTSL 3 BASIC9.14□□□□□ -0.95
Rfx1P48377 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
Rfx1P48377 Gm16585-201ENSMUST00000161442 610 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 Gm16563-201ENSMUST00000162673 423 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
Rfx1P48377 Gm5698-201ENSMUST00000178317 724 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 Gm12424-201ENSMUST00000179673 447 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 Gm29664-201ENSMUST00000191125 463 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC9.14□□□□□ -0.95
Rfx1P48377 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC9.14□□□□□ -0.95
Rfx1P48377 Igkv8-22-201ENSMUST00000199501 367 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 Gm44245-201ENSMUST00000204304 232 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 Gm3198-201ENSMUST00000208725 1026 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 AC113305.1-201ENSMUST00000214664 724 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 Gm18039-201ENSMUST00000217816 728 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 AC159312.1-201ENSMUST00000221508 856 ntTSL 2 BASIC9.14□□□□□ -0.95
Rfx1P48377 AC124356.2-201ENSMUST00000221874 336 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC9.14□□□□□ -0.95
Rfx1P48377 AC147096.1-201ENSMUST00000227648 352 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC9.14□□□□□ -0.95
Rfx1P48377 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC9.14□□□□□ -0.95
Rfx1P48377 Gm24696-201ENSMUST00000083878 134 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Rfx1P48377 Gm18491-201ENSMUST00000192492 1594 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 Gm14373-201ENSMUST00000122467 2158 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC9.14□□□□□ -0.95
Rfx1P48377 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Rfx1P48377 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 Gm44116-201ENSMUST00000204269 1525 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Rfx1P48377 Gm46339-201ENSMUST00000222720 3539 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rfx1P48377 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC9.14□□□□□ -0.95
Rfx1P48377 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rfx1P48377 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rfx1P48377 Gm42852-201ENSMUST00000202649 1379 ntBASIC9.13□□□□□ -0.95
Rfx1P48377 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rfx1P48377 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rfx1P48377 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rfx1P48377 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rfx1P48377 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms