Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 AC126251.1-201ENSMUST00000228170 2707 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 Mei1-203ENSMUST00000188048 3197 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC7.62□□□□□ -1.19
Cxcl12P40224 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Cxcl12P40224 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Cxcl12P40224 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Cxcl12P40224 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm24519-201ENSMUST00000104507 132 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm14727-201ENSMUST00000118526 525 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm4342-201ENSMUST00000118982 367 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm14721-201ENSMUST00000121381 525 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm4886-201ENSMUST00000121874 1176 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm14747-201ENSMUST00000149888 984 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm9359-201ENSMUST00000163721 1221 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm5871-201ENSMUST00000176461 718 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm44571-201ENSMUST00000208092 533 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm45485-201ENSMUST00000211229 357 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 Wdr48-208ENSMUST00000217472 2997 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm18040-201ENSMUST00000217922 827 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Cxcl12P40224 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm25133-201ENSMUST00000082647 130 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 n-R5s217-201ENSMUST00000083341 116 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm24451-201ENSMUST00000083353 133 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 Mir106b-201ENSMUST00000083580 82 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm22351-201ENSMUST00000083925 107 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Cxcl12P40224 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Cxcl12P40224 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Cxcl12P40224 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Cxcl12P40224 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Cxcl12P40224 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Cxcl12P40224 AC159264.1-202ENSMUST00000224856 3162 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Cxcl12P40224 Rfpl4-201ENSMUST00000045215 1598 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Cxcl12P40224 Ncam1-202ENSMUST00000166811 3088 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC7.62□□□□□ -1.19
Cxcl12P40224 Synpo2-201ENSMUST00000051443 3719 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm9874-202ENSMUST00000194957 1464 ntBASIC7.62□□□□□ -1.19
Cxcl12P40224 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Cxcl12P40224 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Cxcl12P40224 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Cxcl12P40224 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 Gm43910-201ENSMUST00000204561 3241 ntBASIC7.61□□□□□ -1.19
Cxcl12P40224 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 Prkar2b-203ENSMUST00000146865 3133 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC7.61□□□□□ -1.19
Cxcl12P40224 AC061963.2-201ENSMUST00000213541 2739 ntBASIC7.61□□□□□ -1.19
Cxcl12P40224 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Cxcl12P40224 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 AC165260.6-202ENSMUST00000224959 1958 ntBASIC7.61□□□□□ -1.19
Cxcl12P40224 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Cxcl12P40224 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 Gm44022-201ENSMUST00000203708 5429 ntBASIC7.61□□□□□ -1.19
Cxcl12P40224 Gm22774-201ENSMUST00000102084 109 ntBASIC7.61□□□□□ -1.19
Cxcl12P40224 Gm26429-201ENSMUST00000104829 110 ntBASIC7.61□□□□□ -1.19
Cxcl12P40224 Gm11920-201ENSMUST00000118491 563 ntBASIC7.61□□□□□ -1.19
Cxcl12P40224 Gm14741-201ENSMUST00000120777 1009 ntBASIC7.61□□□□□ -1.19
Cxcl12P40224 Gm12778-201ENSMUST00000122341 333 ntBASIC7.61□□□□□ -1.19
Cxcl12P40224 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC7.61□□□□□ -1.19
Cxcl12P40224 Gm20396-201ENSMUST00000173358 745 ntBASIC7.61□□□□□ -1.19
Cxcl12P40224 Gm23450-201ENSMUST00000178285 91 ntBASIC7.61□□□□□ -1.19
Cxcl12P40224 Gm9423-201ENSMUST00000183173 997 ntBASIC7.61□□□□□ -1.19
Cxcl12P40224 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC7.61□□□□□ -1.19
Cxcl12P40224 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 Gm8924-201ENSMUST00000197405 1132 ntBASIC7.61□□□□□ -1.19
Cxcl12P40224 Gm42752-201ENSMUST00000198394 1106 ntBASIC7.61□□□□□ -1.19
Cxcl12P40224 Gm21040-201ENSMUST00000199493 1132 ntBASIC7.61□□□□□ -1.19
Cxcl12P40224 Gm44411-201ENSMUST00000204172 349 ntBASIC7.61□□□□□ -1.19
Cxcl12P40224 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC7.61□□□□□ -1.19
Cxcl12P40224 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 1810014B01Rik-205ENSMUST00000218691 323 ntTSL 3 BASIC7.61□□□□□ -1.19
Cxcl12P40224 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC7.61□□□□□ -1.19
Cxcl12P40224 CT009757.4-201ENSMUST00000221520 2541 ntBASIC7.61□□□□□ -1.19
Cxcl12P40224 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Cxcl12P40224 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 Gm45515-201ENSMUST00000210796 2141 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 Olfr1214-202ENSMUST00000216026 2126 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Cxcl12P40224 Oprl1-201ENSMUST00000071585 2999 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 Serping1-201ENSMUST00000023994 1768 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cxcl12P40224 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
Cxcl12P40224 Npy5r-201ENSMUST00000070810 2314 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms