Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC10.82□□□□□ -0.68
Chd1P40201 Gm16204-201ENSMUST00000117864 1897 ntBASIC10.82□□□□□ -0.68
Chd1P40201 Gm13400-201ENSMUST00000117436 380 ntBASIC10.82□□□□□ -0.68
Chd1P40201 Gm15709-201ENSMUST00000118354 213 ntBASIC10.82□□□□□ -0.68
Chd1P40201 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC10.82□□□□□ -0.68
Chd1P40201 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC10.82□□□□□ -0.68
Chd1P40201 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC10.82□□□□□ -0.68
Chd1P40201 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC10.82□□□□□ -0.68
Chd1P40201 Gm43089-201ENSMUST00000199162 275 ntBASIC10.82□□□□□ -0.68
Chd1P40201 BC049739-201ENSMUST00000202626 660 ntBASIC10.82□□□□□ -0.68
Chd1P40201 Gm18600-201ENSMUST00000207205 505 ntBASIC10.82□□□□□ -0.68
Chd1P40201 AL669819.1-201ENSMUST00000225143 330 ntBASIC10.82□□□□□ -0.68
Chd1P40201 Atg13-201ENSMUST00000028678 3604 ntTSL 5 BASIC10.82□□□□□ -0.68
Chd1P40201 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC10.82□□□□□ -0.68
Chd1P40201 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd1P40201 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd1P40201 Mef2a-204ENSMUST00000107476 4759 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd1P40201 Ammecr1l-201ENSMUST00000115808 4769 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd1P40201 Gm36938-201ENSMUST00000191612 2696 ntBASIC10.82□□□□□ -0.68
Chd1P40201 Cacng5-202ENSMUST00000106742 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd1P40201 Ap2b1-205ENSMUST00000176430 3596 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd1P40201 Gm8872-201ENSMUST00000197475 1341 ntBASIC10.82□□□□□ -0.68
Chd1P40201 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Chd1P40201 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd1P40201 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd1P40201 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Chd1P40201 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd1P40201 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd1P40201 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd1P40201 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd1P40201 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd1P40201 Cacna2d4-205ENSMUST00000186622 3710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd1P40201 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd1P40201 Nod2-202ENSMUST00000109634 4666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd1P40201 Gm38244-201ENSMUST00000191737 2586 ntBASIC10.81□□□□□ -0.68
Chd1P40201 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Chd1P40201 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.81□□□□□ -0.68
Chd1P40201 Psmb11-201ENSMUST00000097177 4247 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Chd1P40201 Gm8812-201ENSMUST00000118496 412 ntBASIC10.81□□□□□ -0.68
Chd1P40201 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC10.81□□□□□ -0.68
Chd1P40201 Gm43555-201ENSMUST00000196588 310 ntBASIC10.81□□□□□ -0.68
Chd1P40201 Gm18112-201ENSMUST00000219862 1195 ntBASIC10.81□□□□□ -0.68
Chd1P40201 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Chd1P40201 Gsap-201ENSMUST00000036031 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd1P40201 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Chd1P40201 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd1P40201 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd1P40201 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Chd1P40201 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd1P40201 Slc7a2-202ENSMUST00000098816 3677 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd1P40201 Zfp638-201ENSMUST00000032088 6199 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Chd1P40201 Sept2-213ENSMUST00000168776 3267 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Chd1P40201 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC10.81□□□□□ -0.68
Chd1P40201 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.81□□□□□ -0.68
Chd1P40201 Lhfpl2-202ENSMUST00000118195 3611 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd1P40201 Arhgef9-210ENSMUST00000182001 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd1P40201 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd1P40201 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd1P40201 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd1P40201 Tdrd1-203ENSMUST00000111606 4914 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd1P40201 Zbtb43-201ENSMUST00000028125 4998 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd1P40201 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd1P40201 Gm15616-201ENSMUST00000118662 375 ntBASIC10.81□□□□□ -0.68
Chd1P40201 Gm12242-201ENSMUST00000118824 738 ntBASIC10.81□□□□□ -0.68
Chd1P40201 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Chd1P40201 Gm37349-201ENSMUST00000194205 624 ntBASIC10.81□□□□□ -0.68
Chd1P40201 Gm7343-201ENSMUST00000194510 1061 ntBASIC10.81□□□□□ -0.68
Chd1P40201 Ighv1-44-201ENSMUST00000195597 352 ntBASIC10.81□□□□□ -0.68
Chd1P40201 Gm42753-201ENSMUST00000196718 1268 ntBASIC10.81□□□□□ -0.68
Chd1P40201 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Chd1P40201 AC165260.6-206ENSMUST00000223884 3698 ntBASIC10.81□□□□□ -0.68
Chd1P40201 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Chd1P40201 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd1P40201 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd1P40201 Acpp-202ENSMUST00000112590 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd1P40201 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Chd1P40201 Acbd5-202ENSMUST00000114523 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd1P40201 Gm19024-201ENSMUST00000194681 1319 ntBASIC10.8□□□□□ -0.68
Chd1P40201 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Chd1P40201 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd1P40201 Fbxo11-201ENSMUST00000005504 4019 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Chd1P40201 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Chd1P40201 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Chd1P40201 Gm43071-201ENSMUST00000197233 2032 ntBASIC10.8□□□□□ -0.68
Chd1P40201 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Chd1P40201 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd1P40201 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Chd1P40201 Rab43-201ENSMUST00000032134 4308 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chd1P40201 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd1P40201 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd1P40201 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd1P40201 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Chd1P40201 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd1P40201 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chd1P40201 Mir1960-201ENSMUST00000157488 78 ntBASIC10.8□□□□□ -0.68
Chd1P40201 Gpatch2-206ENSMUST00000160471 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd1P40201 Mir3078-201ENSMUST00000175231 87 ntBASIC10.8□□□□□ -0.68
Chd1P40201 Gm37295-201ENSMUST00000192186 109 ntBASIC10.8□□□□□ -0.68
Chd1P40201 Gm42443-201ENSMUST00000198084 1155 ntBASIC10.8□□□□□ -0.68
Chd1P40201 Gm18586-201ENSMUST00000217265 518 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms