Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC8.6□□□□□ -1.03
Traf1P39428 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC8.6□□□□□ -1.03
Traf1P39428 Gm18860-201ENSMUST00000212029 764 ntBASIC8.6□□□□□ -1.03
Traf1P39428 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC8.6□□□□□ -1.03
Traf1P39428 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC8.6□□□□□ -1.03
Traf1P39428 Gm46311-201ENSMUST00000217971 203 ntBASIC8.6□□□□□ -1.03
Traf1P39428 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC8.6□□□□□ -1.03
Traf1P39428 AC133598.4-201ENSMUST00000224577 454 ntBASIC8.6□□□□□ -1.03
Traf1P39428 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Traf1P39428 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC8.6□□□□□ -1.03
Traf1P39428 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Traf1P39428 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Traf1P39428 Gm10247-201ENSMUST00000090395 333 ntBASIC8.6□□□□□ -1.03
Traf1P39428 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Traf1P39428 Gm43970-201ENSMUST00000204346 3605 ntBASIC8.6□□□□□ -1.03
Traf1P39428 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC8.6□□□□□ -1.03
Traf1P39428 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Traf1P39428 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Traf1P39428 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Traf1P39428 Gm7842-201ENSMUST00000217691 1379 ntBASIC8.6□□□□□ -1.03
Traf1P39428 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC8.6□□□□□ -1.03
Traf1P39428 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Traf1P39428 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC8.59□□□□□ -1.03
Traf1P39428 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Traf1P39428 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Traf1P39428 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Traf1P39428 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC8.59□□□□□ -1.03
Traf1P39428 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Traf1P39428 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Traf1P39428 Gm44996-201ENSMUST00000208787 2980 ntBASIC8.59□□□□□ -1.03
Traf1P39428 Gm22426-201ENSMUST00000103811 96 ntBASIC8.59□□□□□ -1.03
Traf1P39428 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Traf1P39428 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.59□□□□□ -1.03
Traf1P39428 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Traf1P39428 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Traf1P39428 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC8.59□□□□□ -1.03
Traf1P39428 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC8.59□□□□□ -1.03
Traf1P39428 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC8.59□□□□□ -1.03
Traf1P39428 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC8.59□□□□□ -1.03
Traf1P39428 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Traf1P39428 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC8.59□□□□□ -1.03
Traf1P39428 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC8.59□□□□□ -1.03
Traf1P39428 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Traf1P39428 AC135292.2-201ENSMUST00000227559 367 ntBASIC8.59□□□□□ -1.03
Traf1P39428 Gm20302-201ENSMUST00000080671 275 ntBASIC8.59□□□□□ -1.03
Traf1P39428 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Traf1P39428 Gm18726-201ENSMUST00000218175 2010 ntBASIC8.59□□□□□ -1.03
Traf1P39428 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Traf1P39428 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Traf1P39428 Gm42771-201ENSMUST00000198342 2486 ntBASIC8.59□□□□□ -1.03
Traf1P39428 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Traf1P39428 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Traf1P39428 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Traf1P39428 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Traf1P39428 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Traf1P39428 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Traf1P39428 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Traf1P39428 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Traf1P39428 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Traf1P39428 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Traf1P39428 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC8.58□□□□□ -1.04
Traf1P39428 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Traf1P39428 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC8.58□□□□□ -1.04
Traf1P39428 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Traf1P39428 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Traf1P39428 AC159264.1-201ENSMUST00000224844 4257 ntBASIC8.58□□□□□ -1.04
Traf1P39428 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Traf1P39428 Gm13414-201ENSMUST00000117516 727 ntBASIC8.58□□□□□ -1.04
Traf1P39428 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC8.58□□□□□ -1.04
Traf1P39428 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
Traf1P39428 Gm5135-201ENSMUST00000121100 573 ntBASIC8.58□□□□□ -1.04
Traf1P39428 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Traf1P39428 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC8.58□□□□□ -1.04
Traf1P39428 Gm7244-201ENSMUST00000164658 455 ntBASIC8.58□□□□□ -1.04
Traf1P39428 Gm27596-201ENSMUST00000185061 83 ntBASIC8.58□□□□□ -1.04
Traf1P39428 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC8.58□□□□□ -1.04
Traf1P39428 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC8.58□□□□□ -1.04
Traf1P39428 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC8.58□□□□□ -1.04
Traf1P39428 Gm44147-201ENSMUST00000204658 94 ntBASIC8.58□□□□□ -1.04
Traf1P39428 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC8.58□□□□□ -1.04
Traf1P39428 Gm45900-201ENSMUST00000211879 409 ntBASIC8.58□□□□□ -1.04
Traf1P39428 AC122309.1-201ENSMUST00000226945 421 ntBASIC8.58□□□□□ -1.04
Traf1P39428 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Traf1P39428 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Traf1P39428 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Traf1P39428 Gm24411-201ENSMUST00000083428 131 ntBASIC8.58□□□□□ -1.04
Traf1P39428 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Traf1P39428 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
Traf1P39428 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Traf1P39428 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Traf1P39428 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Traf1P39428 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Traf1P39428 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Traf1P39428 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Traf1P39428 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
Traf1P39428 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Traf1P39428 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Traf1P39428 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Traf1P39428 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Traf1P39428 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms