Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col18a1P39061 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col18a1P39061 Lin54-202ENSMUST00000123572 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col18a1P39061 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col18a1P39061 Rimklb-206ENSMUST00000204731 3039 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col18a1P39061 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Col18a1P39061 D5Ertd615e-202ENSMUST00000197016 3911 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col18a1P39061 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col18a1P39061 Gm37199-201ENSMUST00000193881 4065 ntBASIC9.59□□□□□ -0.87
Col18a1P39061 Tcf24-201ENSMUST00000097824 2639 ntBASIC9.59□□□□□ -0.87
Col18a1P39061 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col18a1P39061 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Col18a1P39061 Zfp638-201ENSMUST00000032088 6199 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Col18a1P39061 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC9.59□□□□□ -0.87
Col18a1P39061 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Col18a1P39061 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Col18a1P39061 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col18a1P39061 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Col18a1P39061 Gm43071-201ENSMUST00000197233 2032 ntBASIC9.58□□□□□ -0.88
Col18a1P39061 AC093043.2-201ENSMUST00000228616 2017 ntBASIC9.58□□□□□ -0.88
Col18a1P39061 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Snora35-201ENSMUST00000104579 128 ntBASIC9.58□□□□□ -0.88
Col18a1P39061 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Col18a1P39061 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC9.58□□□□□ -0.88
Col18a1P39061 Gm5401-201ENSMUST00000122444 365 ntBASIC9.58□□□□□ -0.88
Col18a1P39061 Gm25653-201ENSMUST00000158473 138 ntBASIC9.58□□□□□ -0.88
Col18a1P39061 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Col18a1P39061 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Gm37517-201ENSMUST00000194004 1289 ntBASIC9.58□□□□□ -0.88
Col18a1P39061 Gm29747-201ENSMUST00000194764 585 ntBASIC9.58□□□□□ -0.88
Col18a1P39061 Gm43089-201ENSMUST00000199162 275 ntBASIC9.58□□□□□ -0.88
Col18a1P39061 n-TStga1-201ENSMUST00000199903 109 ntBASIC9.58□□□□□ -0.88
Col18a1P39061 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC9.58□□□□□ -0.88
Col18a1P39061 Gm19540-201ENSMUST00000221843 810 ntBASIC9.58□□□□□ -0.88
Col18a1P39061 AC138329.1-201ENSMUST00000225040 471 ntBASIC9.58□□□□□ -0.88
Col18a1P39061 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Gm25131-201ENSMUST00000082653 151 ntBASIC9.58□□□□□ -0.88
Col18a1P39061 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Col18a1P39061 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC9.58□□□□□ -0.88
Col18a1P39061 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Grin2a-201ENSMUST00000032331 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Oacyl-201ENSMUST00000115097 3431 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Gm42930-201ENSMUST00000200872 3260 ntBASIC9.58□□□□□ -0.88
Col18a1P39061 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Lhfpl2-202ENSMUST00000118195 3611 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Abcc4-202ENSMUST00000166646 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC9.58□□□□□ -0.88
Col18a1P39061 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Tdrd1-203ENSMUST00000111606 4914 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Pex5l-208ENSMUST00000192093 3421 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Htr4-201ENSMUST00000027560 4657 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Scml4-202ENSMUST00000105494 4166 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Col18a1P39061 Gm22194-201ENSMUST00000116869 95 ntBASIC9.58□□□□□ -0.88
Col18a1P39061 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Col18a1P39061 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 Gm27507-201ENSMUST00000184199 93 ntBASIC9.58□□□□□ -0.88
Col18a1P39061 Gm27210-201ENSMUST00000184263 402 ntBASIC9.58□□□□□ -0.88
Col18a1P39061 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC9.58□□□□□ -0.88
Col18a1P39061 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Col18a1P39061 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC9.58□□□□□ -0.88
Col18a1P39061 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC9.58□□□□□ -0.88
Col18a1P39061 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col18a1P39061 AC153143.2-201ENSMUST00000220999 1804 ntBASIC9.57□□□□□ -0.88
Col18a1P39061 Epn2-201ENSMUST00000001063 4243 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Cacng5-202ENSMUST00000106742 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Adgrf4-203ENSMUST00000167993 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Col18a1P39061 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Col18a1P39061 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Gm44001-201ENSMUST00000203158 3773 ntBASIC9.57□□□□□ -0.88
Col18a1P39061 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC9.57□□□□□ -0.88
Col18a1P39061 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC9.57□□□□□ -0.88
Col18a1P39061 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Col18a1P39061 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Gm11443-201ENSMUST00000118790 479 ntBASIC9.57□□□□□ -0.88
Col18a1P39061 Gm25387-201ENSMUST00000157813 132 ntBASIC9.57□□□□□ -0.88
Col18a1P39061 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Mir7220-201ENSMUST00000183978 60 ntBASIC9.57□□□□□ -0.88
Col18a1P39061 Gm27299-201ENSMUST00000184593 103 ntBASIC9.57□□□□□ -0.88
Col18a1P39061 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col18a1P39061 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC9.57□□□□□ -0.88
Col18a1P39061 AC147782.1-201ENSMUST00000219169 475 ntBASIC9.57□□□□□ -0.88
Col18a1P39061 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms