Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC7.89□□□□□ -1.15
Usp4P35123 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Usp4P35123 Gm15049-201ENSMUST00000120474 463 ntBASIC7.89□□□□□ -1.15
Usp4P35123 Gm1947-201ENSMUST00000122451 910 ntBASIC7.89□□□□□ -1.15
Usp4P35123 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC7.89□□□□□ -1.15
Usp4P35123 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC7.89□□□□□ -1.15
Usp4P35123 Gm7162-201ENSMUST00000161205 1024 ntBASIC7.89□□□□□ -1.15
Usp4P35123 Gm4207-201ENSMUST00000173144 960 ntBASIC7.89□□□□□ -1.15
Usp4P35123 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Usp4P35123 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC7.89□□□□□ -1.15
Usp4P35123 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC7.89□□□□□ -1.15
Usp4P35123 Gm37024-201ENSMUST00000192224 868 ntBASIC7.89□□□□□ -1.15
Usp4P35123 Gm37977-201ENSMUST00000193096 721 ntBASIC7.89□□□□□ -1.15
Usp4P35123 Gm38063-201ENSMUST00000193990 342 ntBASIC7.89□□□□□ -1.15
Usp4P35123 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Usp4P35123 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Usp4P35123 Gm42861-201ENSMUST00000199596 634 ntBASIC7.89□□□□□ -1.15
Usp4P35123 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC7.89□□□□□ -1.15
Usp4P35123 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC7.89□□□□□ -1.15
Usp4P35123 Klra13-ps-203ENSMUST00000204367 850 ntBASIC7.89□□□□□ -1.15
Usp4P35123 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Usp4P35123 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC7.89□□□□□ -1.15
Usp4P35123 AC147096.1-201ENSMUST00000227648 352 ntBASIC7.89□□□□□ -1.15
Usp4P35123 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC7.89□□□□□ -1.15
Usp4P35123 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 AC122426.2-201ENSMUST00000216522 2947 ntBASIC7.89□□□□□ -1.15
Usp4P35123 CU024890.1-201ENSMUST00000221361 2019 ntBASIC7.89□□□□□ -1.15
Usp4P35123 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Usp4P35123 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC7.89□□□□□ -1.15
Usp4P35123 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC7.89□□□□□ -1.15
Usp4P35123 Gm10623-201ENSMUST00000209081 2639 ntBASIC7.89□□□□□ -1.15
Usp4P35123 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC7.89□□□□□ -1.15
Usp4P35123 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 Gm37618-201ENSMUST00000192891 3075 ntBASIC7.89□□□□□ -1.15
Usp4P35123 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 Gm20121-201ENSMUST00000198547 1594 ntBASIC7.88□□□□□ -1.15
Usp4P35123 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Usp4P35123 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp4P35123 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Usp4P35123 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp4P35123 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC7.88□□□□□ -1.15
Usp4P35123 AC122878.1-201ENSMUST00000227716 1460 ntBASIC7.88□□□□□ -1.15
Usp4P35123 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Usp4P35123 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp4P35123 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
Usp4P35123 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
Usp4P35123 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp4P35123 Gm8177-201ENSMUST00000181591 1336 ntBASIC7.88□□□□□ -1.15
Usp4P35123 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp4P35123 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Usp4P35123 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp4P35123 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp4P35123 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC7.88□□□□□ -1.15
Usp4P35123 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC7.88□□□□□ -1.15
Usp4P35123 Gm12978-201ENSMUST00000121250 522 ntBASIC7.88□□□□□ -1.15
Usp4P35123 Gm13776-201ENSMUST00000122236 1261 ntBASIC7.88□□□□□ -1.15
Usp4P35123 Gm6689-201ENSMUST00000130905 481 ntBASIC7.88□□□□□ -1.15
Usp4P35123 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC7.88□□□□□ -1.15
Usp4P35123 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp4P35123 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC7.88□□□□□ -1.15
Usp4P35123 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC7.88□□□□□ -1.15
Usp4P35123 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC7.88□□□□□ -1.15
Usp4P35123 Gm23117-201ENSMUST00000158482 108 ntBASIC7.88□□□□□ -1.15
Usp4P35123 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC7.88□□□□□ -1.15
Usp4P35123 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC7.88□□□□□ -1.15
Usp4P35123 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC7.88□□□□□ -1.15
Usp4P35123 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC7.88□□□□□ -1.15
Usp4P35123 Ighv1-17-201ENSMUST00000194435 350 ntBASIC7.88□□□□□ -1.15
Usp4P35123 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC7.88□□□□□ -1.15
Usp4P35123 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC7.88□□□□□ -1.15
Usp4P35123 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC7.88□□□□□ -1.15
Usp4P35123 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC7.88□□□□□ -1.15
Usp4P35123 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC7.88□□□□□ -1.15
Usp4P35123 AC092710.1-201ENSMUST00000221005 192 ntBASIC7.88□□□□□ -1.15
Usp4P35123 AC163667.2-201ENSMUST00000223769 791 ntBASIC7.88□□□□□ -1.15
Usp4P35123 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Usp4P35123 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
Usp4P35123 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC7.88□□□□□ -1.15
Usp4P35123 Gm45528-201ENSMUST00000209854 3145 ntBASIC7.88□□□□□ -1.15
Usp4P35123 Gm43728-201ENSMUST00000198817 2622 ntBASIC7.88□□□□□ -1.15
Usp4P35123 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC7.88□□□□□ -1.15
Usp4P35123 Gm10388-201ENSMUST00000205001 2936 ntBASIC7.88□□□□□ -1.15
Usp4P35123 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp4P35123 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp4P35123 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp4P35123 Gm37980-201ENSMUST00000194420 1910 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms