Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 CT009604.1-201ENSMUST00000223900 1328 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col2a1P28481 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
Col2a1P28481 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col2a1P28481 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col2a1P28481 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col2a1P28481 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col2a1P28481 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Col2a1P28481 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col2a1P28481 Gm15229-201ENSMUST00000146636 1398 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC8.26□□□□□ -1.09
Col2a1P28481 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Col2a1P28481 Gm14729-201ENSMUST00000118373 689 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 Gm6987-201ENSMUST00000119319 428 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC8.26□□□□□ -1.09
Col2a1P28481 Gm25556-201ENSMUST00000158077 144 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 Gm24545-201ENSMUST00000158651 85 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC8.26□□□□□ -1.09
Col2a1P28481 Gm3511-201ENSMUST00000199823 204 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 Gm44227-201ENSMUST00000203576 241 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 Gm44856-201ENSMUST00000206639 304 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 Gm45279-201ENSMUST00000210315 391 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC8.26□□□□□ -1.09
Col2a1P28481 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC8.26□□□□□ -1.09
Col2a1P28481 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col2a1P28481 AC153152.2-201ENSMUST00000223165 959 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 AC164436.1-201ENSMUST00000227074 772 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col2a1P28481 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Col2a1P28481 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col2a1P28481 Gpr87-201ENSMUST00000056898 1080 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Col2a1P28481 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
Col2a1P28481 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col2a1P28481 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
Col2a1P28481 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col2a1P28481 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col2a1P28481 AC107763.1-202ENSMUST00000225021 2663 ntBASIC8.25□□□□□ -1.09
Col2a1P28481 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col2a1P28481 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col2a1P28481 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col2a1P28481 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Col2a1P28481 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col2a1P28481 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col2a1P28481 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC8.25□□□□□ -1.09
Col2a1P28481 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC8.25□□□□□ -1.09
Col2a1P28481 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Col2a1P28481 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col2a1P28481 Retreg1-203ENSMUST00000226438 2783 ntBASIC8.25□□□□□ -1.09
Col2a1P28481 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC8.25□□□□□ -1.09
Col2a1P28481 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC8.25□□□□□ -1.09
Col2a1P28481 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Col2a1P28481 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.25□□□□□ -1.09
Col2a1P28481 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
Col2a1P28481 Gm15903-202ENSMUST00000199631 3518 ntBASIC8.25□□□□□ -1.09
Col2a1P28481 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col2a1P28481 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Col2a1P28481 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col2a1P28481 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC8.25□□□□□ -1.09
Col2a1P28481 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Col2a1P28481 Mir697-201ENSMUST00000102316 109 ntBASIC8.25□□□□□ -1.09
Col2a1P28481 Mir760-201ENSMUST00000103257 119 ntBASIC8.25□□□□□ -1.09
Col2a1P28481 Gm5166-201ENSMUST00000121332 573 ntBASIC8.25□□□□□ -1.09
Col2a1P28481 BC064078-201ENSMUST00000122939 570 ntBASIC8.25□□□□□ -1.09
Col2a1P28481 Gm24286-201ENSMUST00000157632 128 ntBASIC8.25□□□□□ -1.09
Col2a1P28481 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col2a1P28481 Gm27018-201ENSMUST00000181136 225 ntBASIC8.25□□□□□ -1.09
Col2a1P28481 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col2a1P28481 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC8.25□□□□□ -1.09
Col2a1P28481 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.25□□□□□ -1.09
Col2a1P28481 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC8.25□□□□□ -1.09
Col2a1P28481 Gm17822-201ENSMUST00000204307 351 ntBASIC8.25□□□□□ -1.09
Col2a1P28481 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC8.25□□□□□ -1.09
Col2a1P28481 AC155709.1-201ENSMUST00000218794 162 ntBASIC8.25□□□□□ -1.09
Col2a1P28481 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col2a1P28481 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Col2a1P28481 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Col2a1P28481 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col2a1P28481 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC8.25□□□□□ -1.09
Col2a1P28481 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col2a1P28481 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC8.24□□□□□ -1.09
Col2a1P28481 AC130219.1-201ENSMUST00000228406 3433 ntBASIC8.24□□□□□ -1.09
Col2a1P28481 AC132474.1-201ENSMUST00000214407 3686 ntBASIC8.24□□□□□ -1.09
Col2a1P28481 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col2a1P28481 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col2a1P28481 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col2a1P28481 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC8.24□□□□□ -1.09
Col2a1P28481 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC8.24□□□□□ -1.09
Col2a1P28481 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col2a1P28481 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col2a1P28481 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col2a1P28481 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Col2a1P28481 Gm44104-201ENSMUST00000204736 3777 ntBASIC8.24□□□□□ -1.09
Col2a1P28481 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Col2a1P28481 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col2a1P28481 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col2a1P28481 Gm25724-201ENSMUST00000104531 117 ntBASIC8.24□□□□□ -1.09
Col2a1P28481 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
Col2a1P28481 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Col2a1P28481 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms