Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Col1a1P11087 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col1a1P11087 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col1a1P11087 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col1a1P11087 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Col1a1P11087 Gm19031-201ENSMUST00000176280 1365 ntBASIC8.56□□□□□ -1.04
Col1a1P11087 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
Col1a1P11087 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Col1a1P11087 Gm14513-201ENSMUST00000117403 123 ntBASIC8.56□□□□□ -1.04
Col1a1P11087 Gm13141-201ENSMUST00000117417 456 ntBASIC8.56□□□□□ -1.04
Col1a1P11087 Gm12959-201ENSMUST00000119396 403 ntBASIC8.56□□□□□ -1.04
Col1a1P11087 Gm14612-201ENSMUST00000121522 881 ntBASIC8.56□□□□□ -1.04
Col1a1P11087 Gm23430-201ENSMUST00000122490 314 ntBASIC8.56□□□□□ -1.04
Col1a1P11087 Gm24756-201ENSMUST00000177002 96 ntBASIC8.56□□□□□ -1.04
Col1a1P11087 Gm19175-201ENSMUST00000199895 916 ntBASIC8.56□□□□□ -1.04
Col1a1P11087 Gm18995-201ENSMUST00000202981 520 ntBASIC8.56□□□□□ -1.04
Col1a1P11087 Gm18690-201ENSMUST00000204488 985 ntBASIC8.56□□□□□ -1.04
Col1a1P11087 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC8.56□□□□□ -1.04
Col1a1P11087 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Col1a1P11087 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Col1a1P11087 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Col1a1P11087 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Col1a1P11087 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Col1a1P11087 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC8.56□□□□□ -1.04
Col1a1P11087 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Col1a1P11087 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col1a1P11087 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Col1a1P11087 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col1a1P11087 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Col1a1P11087 Gm38262-201ENSMUST00000194760 1382 ntBASIC8.55□□□□□ -1.04
Col1a1P11087 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Col1a1P11087 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC8.55□□□□□ -1.04
Col1a1P11087 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col1a1P11087 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Col1a1P11087 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col1a1P11087 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Col1a1P11087 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col1a1P11087 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col1a1P11087 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Col1a1P11087 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Col1a1P11087 Gm12740-201ENSMUST00000118794 308 ntBASIC8.55□□□□□ -1.04
Col1a1P11087 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC8.55□□□□□ -1.04
Col1a1P11087 Gm2709-201ENSMUST00000142979 350 ntBASIC8.55□□□□□ -1.04
Col1a1P11087 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Col1a1P11087 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col1a1P11087 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC8.55□□□□□ -1.04
Col1a1P11087 Gm28266-201ENSMUST00000191410 439 ntBASIC8.55□□□□□ -1.04
Col1a1P11087 Gm38068-201ENSMUST00000192546 540 ntBASIC8.55□□□□□ -1.04
Col1a1P11087 Gm17895-201ENSMUST00000194028 874 ntBASIC8.55□□□□□ -1.04
Col1a1P11087 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC8.55□□□□□ -1.04
Col1a1P11087 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC8.55□□□□□ -1.04
Col1a1P11087 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC8.55□□□□□ -1.04
Col1a1P11087 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Col1a1P11087 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col1a1P11087 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Col1a1P11087 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Col1a1P11087 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Col1a1P11087 Gm18451-201ENSMUST00000196759 1719 ntBASIC8.55□□□□□ -1.04
Col1a1P11087 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Col1a1P11087 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col1a1P11087 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col1a1P11087 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC8.55□□□□□ -1.04
Col1a1P11087 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC8.55□□□□□ -1.04
Col1a1P11087 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Col1a1P11087 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Col1a1P11087 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col1a1P11087 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col1a1P11087 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col1a1P11087 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC8.55□□□□□ -1.04
Col1a1P11087 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC8.55□□□□□ -1.04
Col1a1P11087 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Col1a1P11087 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Col1a1P11087 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col1a1P11087 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Col1a1P11087 Dsc3-201ENSMUST00000115848 5333 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
Col1a1P11087 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Col1a1P11087 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col1a1P11087 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 AC187103.1-201ENSMUST00000224641 1475 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Col1a1P11087 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col1a1P11087 Gm12439-201ENSMUST00000117162 365 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Gm10913-201ENSMUST00000133732 463 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC8.54□□□□□ -1.04
Col1a1P11087 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Col1a1P11087 Gm10177-201ENSMUST00000160052 444 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Rps12l1-201ENSMUST00000183090 399 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Col1a1P11087 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Col1a1P11087 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms