Protein–RNA interactions for Protein: P09925

Surf1, Surfeit locus protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf1P09925 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Surf1P09925 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Surf1P09925 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Surf1P09925 AC121286.2-201ENSMUST00000218069 2470 ntBASIC8.27□□□□□ -1.09
Surf1P09925 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Surf1P09925 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Surf1P09925 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Surf1P09925 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Surf1P09925 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC8.27□□□□□ -1.09
Surf1P09925 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Surf1P09925 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Surf1P09925 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC8.26□□□□□ -1.09
Surf1P09925 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 Gm18908-201ENSMUST00000207125 1483 ntBASIC8.26□□□□□ -1.09
Surf1P09925 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC8.26□□□□□ -1.09
Surf1P09925 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.26□□□□□ -1.09
Surf1P09925 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.26□□□□□ -1.09
Surf1P09925 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Surf1P09925 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC8.26□□□□□ -1.09
Surf1P09925 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Surf1P09925 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC8.26□□□□□ -1.09
Surf1P09925 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 Gm15586-201ENSMUST00000121218 528 ntBASIC8.26□□□□□ -1.09
Surf1P09925 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC8.26□□□□□ -1.09
Surf1P09925 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC8.26□□□□□ -1.09
Surf1P09925 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC8.26□□□□□ -1.09
Surf1P09925 Trav8-2-201ENSMUST00000130122 337 ntBASIC8.26□□□□□ -1.09
Surf1P09925 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC8.26□□□□□ -1.09
Surf1P09925 Gm22206-201ENSMUST00000158612 116 ntBASIC8.26□□□□□ -1.09
Surf1P09925 Gm23027-201ENSMUST00000158771 158 ntBASIC8.26□□□□□ -1.09
Surf1P09925 Gm7991-201ENSMUST00000168668 591 ntBASIC8.26□□□□□ -1.09
Surf1P09925 Gm7502-201ENSMUST00000169235 733 ntBASIC8.26□□□□□ -1.09
Surf1P09925 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 Gm6536-201ENSMUST00000171180 615 ntBASIC8.26□□□□□ -1.09
Surf1P09925 Gm28894-201ENSMUST00000185214 615 ntBASIC8.26□□□□□ -1.09
Surf1P09925 Gm28142-201ENSMUST00000186899 698 ntBASIC8.26□□□□□ -1.09
Surf1P09925 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC8.26□□□□□ -1.09
Surf1P09925 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 Gm37369-201ENSMUST00000194179 615 ntBASIC8.26□□□□□ -1.09
Surf1P09925 Gm5723-201ENSMUST00000203096 432 ntBASIC8.26□□□□□ -1.09
Surf1P09925 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC8.26□□□□□ -1.09
Surf1P09925 AC139941.1-201ENSMUST00000221517 478 ntBASIC8.26□□□□□ -1.09
Surf1P09925 AC163038.4-201ENSMUST00000224942 474 ntBASIC8.26□□□□□ -1.09
Surf1P09925 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC8.26□□□□□ -1.09
Surf1P09925 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 CT009480.1-201ENSMUST00000225771 4480 ntBASIC8.26□□□□□ -1.09
Surf1P09925 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC8.26□□□□□ -1.09
Surf1P09925 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Surf1P09925 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC8.26□□□□□ -1.09
Surf1P09925 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC8.26□□□□□ -1.09
Surf1P09925 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Surf1P09925 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Surf1P09925 Gm43873-201ENSMUST00000204505 3938 ntBASIC8.25□□□□□ -1.09
Surf1P09925 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Surf1P09925 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC8.25□□□□□ -1.09
Surf1P09925 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Surf1P09925 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Surf1P09925 Gm26831-201ENSMUST00000181458 1380 ntBASIC8.25□□□□□ -1.09
Surf1P09925 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Surf1P09925 Gm36930-201ENSMUST00000195431 2376 ntBASIC8.25□□□□□ -1.09
Surf1P09925 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Surf1P09925 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Surf1P09925 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC8.25□□□□□ -1.09
Surf1P09925 Gm16221-201ENSMUST00000117331 393 ntBASIC8.25□□□□□ -1.09
Surf1P09925 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Surf1P09925 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Surf1P09925 Gm23945-201ENSMUST00000179609 92 ntBASIC8.25□□□□□ -1.09
Surf1P09925 Gm2287-201ENSMUST00000197417 1084 ntBASIC8.25□□□□□ -1.09
Surf1P09925 Gm19175-201ENSMUST00000199895 916 ntBASIC8.25□□□□□ -1.09
Surf1P09925 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC8.25□□□□□ -1.09
Surf1P09925 Gm5791-201ENSMUST00000220840 489 ntBASIC8.25□□□□□ -1.09
Surf1P09925 AC118006.3-201ENSMUST00000223948 1176 ntBASIC8.25□□□□□ -1.09
Surf1P09925 AC154487.1-201ENSMUST00000224649 226 ntBASIC8.25□□□□□ -1.09
Surf1P09925 AC154461.4-201ENSMUST00000224878 468 ntBASIC8.25□□□□□ -1.09
Surf1P09925 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Surf1P09925 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Surf1P09925 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Surf1P09925 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Surf1P09925 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Surf1P09925 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Surf1P09925 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Surf1P09925 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Surf1P09925 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms