Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxc9P09633 Gm29486-201ENSMUST00000088648 372 ntBASIC9.46□□□□□ -0.9
Hoxc9P09633 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Hoxc9P09633 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxc9P09633 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxc9P09633 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxc9P09633 Gm26645-201ENSMUST00000181076 1316 ntBASIC9.46□□□□□ -0.9
Hoxc9P09633 Gm7690-201ENSMUST00000190885 1399 ntBASIC9.46□□□□□ -0.9
Hoxc9P09633 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Hoxc9P09633 Ephx2-202ENSMUST00000224698 1985 ntBASIC9.46□□□□□ -0.9
Hoxc9P09633 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Hoxc9P09633 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC9.46□□□□□ -0.9
Hoxc9P09633 AC155270.1-201ENSMUST00000221626 4028 ntBASIC9.46□□□□□ -0.9
Hoxc9P09633 AC130219.1-201ENSMUST00000228406 3433 ntBASIC9.46□□□□□ -0.9
Hoxc9P09633 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxc9P09633 Klf10-202ENSMUST00000226363 2917 ntBASIC9.45□□□□□ -0.9
Hoxc9P09633 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm18451-201ENSMUST00000196759 1719 ntBASIC9.45□□□□□ -0.9
Hoxc9P09633 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
Hoxc9P09633 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Hoxc9P09633 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Hoxc9P09633 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm13732-201ENSMUST00000117753 535 ntBASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC9.45□□□□□ -0.9
Hoxc9P09633 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC9.45□□□□□ -0.9
Hoxc9P09633 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm28952-201ENSMUST00000189285 681 ntBASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm28377-201ENSMUST00000189695 720 ntBASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm19211-201ENSMUST00000200251 1206 ntBASIC9.45□□□□□ -0.9
Hoxc9P09633 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm9357-201ENSMUST00000207138 805 ntBASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm2221-201ENSMUST00000209342 418 ntBASIC9.45□□□□□ -0.9
Hoxc9P09633 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC9.45□□□□□ -0.9
Hoxc9P09633 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC9.45□□□□□ -0.9
Hoxc9P09633 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC9.45□□□□□ -0.9
Hoxc9P09633 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC9.45□□□□□ -0.9
Hoxc9P09633 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 AC124489.3-201ENSMUST00000224037 278 ntBASIC9.45□□□□□ -0.9
Hoxc9P09633 CT009713.5-201ENSMUST00000224508 909 ntBASIC9.45□□□□□ -0.9
Hoxc9P09633 AC154324.1-201ENSMUST00000226711 814 ntBASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm5528-201ENSMUST00000076314 480 ntBASIC9.45□□□□□ -0.9
Hoxc9P09633 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Hoxc9P09633 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Hoxc9P09633 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC9.45□□□□□ -0.9
Hoxc9P09633 Cdc6-202ENSMUST00000093937 2559 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC9.45□□□□□ -0.9
Hoxc9P09633 Sycp2l-201ENSMUST00000124093 2641 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Hoxc9P09633 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm43189-201ENSMUST00000196040 3069 ntBASIC9.45□□□□□ -0.9
Hoxc9P09633 Gm38300-201ENSMUST00000194245 1870 ntBASIC9.45□□□□□ -0.9
Hoxc9P09633 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC9.45□□□□□ -0.9
Hoxc9P09633 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxc9P09633 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxc9P09633 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxc9P09633 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Hoxc9P09633 Gm9144-201ENSMUST00000101625 1008 ntBASIC9.44□□□□□ -0.9
Hoxc9P09633 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Hoxc9P09633 Gm13183-201ENSMUST00000118615 789 ntBASIC9.44□□□□□ -0.9
Hoxc9P09633 Gm12740-201ENSMUST00000118794 308 ntBASIC9.44□□□□□ -0.9
Hoxc9P09633 Gm11343-201ENSMUST00000120579 599 ntBASIC9.44□□□□□ -0.9
Hoxc9P09633 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC9.44□□□□□ -0.9
Hoxc9P09633 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC9.44□□□□□ -0.9
Hoxc9P09633 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC9.44□□□□□ -0.9
Hoxc9P09633 Gm25395-201ENSMUST00000157343 272 ntBASIC9.44□□□□□ -0.9
Hoxc9P09633 Gm9359-201ENSMUST00000163721 1221 ntBASIC9.44□□□□□ -0.9
Hoxc9P09633 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxc9P09633 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxc9P09633 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC9.44□□□□□ -0.9
Hoxc9P09633 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Hoxc9P09633 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Hoxc9P09633 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC9.44□□□□□ -0.9
Hoxc9P09633 Gm44902-201ENSMUST00000206177 805 ntBASIC9.44□□□□□ -0.9
Hoxc9P09633 Gm45432-201ENSMUST00000210391 416 ntBASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms