Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx1-1G3UXB3 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Ankk1-201ENSMUST00000034792 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Ebf1-201ENSMUST00000081265 5981 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Chil1-208ENSMUST00000156873 1645 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Katnal1-201ENSMUST00000047257 6157 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Sf3b3-201ENSMUST00000042012 4525 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Mterf2-201ENSMUST00000050813 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Piwil4-201ENSMUST00000076946 2637 ntTSL 2 BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Pear1-216ENSMUST00000174759 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm23834-201ENSMUST00000104436 129 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm11241-201ENSMUST00000117371 896 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm15464-201ENSMUST00000118718 431 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm13228-201ENSMUST00000118937 634 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm12771-201ENSMUST00000120246 135 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm11341-201ENSMUST00000122316 447 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm12493-201ENSMUST00000150111 441 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm25827-201ENSMUST00000157089 107 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm8974-201ENSMUST00000175770 479 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm4832-201ENSMUST00000182679 399 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm29197-201ENSMUST00000185922 702 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm43480-201ENSMUST00000201201 416 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm44203-201ENSMUST00000203134 307 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm44163-201ENSMUST00000205140 475 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm19880-201ENSMUST00000207731 318 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 AC124510.2-201ENSMUST00000221958 683 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm10054-201ENSMUST00000223362 431 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 AC119241.1-201ENSMUST00000223651 534 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 AC069562.1-201ENSMUST00000224206 434 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gpx2-201ENSMUST00000082431 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Akap14-201ENSMUST00000046557 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Etos1-201ENSMUST00000057134 2015 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm3616-201ENSMUST00000174430 2514 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm3683-201ENSMUST00000175701 2513 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 AC160405.2-201ENSMUST00000219008 1987 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm38697-201ENSMUST00000198061 1746 ntBASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Zcchc12-204ENSMUST00000115258 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Srgap1-202ENSMUST00000081688 7787 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Gm53-204ENSMUST00000150490 3257 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Tmem260-202ENSMUST00000124720 3035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx1-1G3UXB3 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Nox1-204ENSMUST00000159259 1581 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Sfmbt2-203ENSMUST00000114862 1763 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Isx-201ENSMUST00000034034 1793 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 4930511J24Rik-201ENSMUST00000223541 1528 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Abcc9-206ENSMUST00000205202 4752 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Gm14094-201ENSMUST00000117717 610 ntBASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Gm11784-201ENSMUST00000118568 474 ntBASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Gm12219-201ENSMUST00000119198 443 ntBASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Gm8761-201ENSMUST00000121507 955 ntBASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Gm12755-201ENSMUST00000122297 282 ntBASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Gm6956-201ENSMUST00000134724 546 ntBASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Nkx1-1G3UXB3 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms