Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm6292-201ENSMUST00000120712 1095 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm12692-201ENSMUST00000121092 546 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm25845-201ENSMUST00000122588 310 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm24883-201ENSMUST00000158391 281 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm22424-201ENSMUST00000158527 87 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm6536-201ENSMUST00000171180 615 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm18191-201ENSMUST00000174624 824 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm22132-201ENSMUST00000175316 100 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm8974-201ENSMUST00000175770 479 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm27039-201ENSMUST00000182438 962 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm18797-201ENSMUST00000190809 1174 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm38254-201ENSMUST00000192276 1009 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm42489-201ENSMUST00000198964 669 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm8703-201ENSMUST00000203793 730 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm18943-201ENSMUST00000207357 1216 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm4536-201ENSMUST00000209157 542 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm18192-201ENSMUST00000210174 941 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm3213-201ENSMUST00000219296 441 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 AC123920.1-201ENSMUST00000221449 384 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 CT009733.1-203ENSMUST00000224033 451 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 AC166574.1-201ENSMUST00000226916 1309 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Gm28240-201ENSMUST00000187560 2053 ntBASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Sec61a2Q9JLR1 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Gm44249-201ENSMUST00000204538 1805 ntBASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Mir669p-2-201ENSMUST00000103868 87 ntBASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Mir669p-1-201ENSMUST00000103884 87 ntBASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Gm11907-201ENSMUST00000118918 1007 ntBASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Gm12993-201ENSMUST00000119900 479 ntBASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Gm25780-201ENSMUST00000122528 253 ntBASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Gm22847-201ENSMUST00000157707 105 ntBASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Gm25653-201ENSMUST00000158473 138 ntBASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Gm4246-201ENSMUST00000172822 216 ntBASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Mir8097-201ENSMUST00000185150 119 ntBASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Gm18349-201ENSMUST00000187440 904 ntBASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 AC137678.1-201ENSMUST00000198370 118 ntBASIC6.88□□□□□ -1.31
Sec61a2Q9JLR1 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 241.3 ms