Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cacna1fQ9JIS7 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Cacna1fQ9JIS7 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cacna1fQ9JIS7 D5Ertd615e-202ENSMUST00000197016 3911 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cacna1fQ9JIS7 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Cacna1fQ9JIS7 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cacna1fQ9JIS7 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cacna1fQ9JIS7 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cacna1fQ9JIS7 Prkaa2-201ENSMUST00000030243 7969 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cacna1fQ9JIS7 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cacna1fQ9JIS7 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Dlc1-206ENSMUST00000163663 5113 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Kirrel3-206ENSMUST00000187625 4108 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Dpp6-203ENSMUST00000120555 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gm6654-201ENSMUST00000118950 348 ntBASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gm2709-201ENSMUST00000142979 350 ntBASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Mir6244-201ENSMUST00000184156 117 ntBASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gm37620-201ENSMUST00000192910 501 ntBASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gm42584-201ENSMUST00000201404 220 ntBASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Trp63-201ENSMUST00000040231 4703 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Klhl1-201ENSMUST00000022666 6645 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Cep83os-201ENSMUST00000181906 6566 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 St3gal1-201ENSMUST00000092640 4985 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gm38300-201ENSMUST00000194245 1870 ntBASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Klf10-202ENSMUST00000226363 2917 ntBASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gm37161-201ENSMUST00000191994 2697 ntBASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gm8662-201ENSMUST00000118644 574 ntBASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gm12920-201ENSMUST00000121818 1186 ntBASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gm16248-201ENSMUST00000124238 243 ntBASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gm8609-201ENSMUST00000182967 998 ntBASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 AC069561.1-201ENSMUST00000213750 424 ntBASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 AC167013.4-201ENSMUST00000226712 317 ntBASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC8.3□□□□□ -1.08
Cacna1fQ9JIS7 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Gm37159-201ENSMUST00000192720 3605 ntBASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 AC154828.1-201ENSMUST00000220696 2810 ntBASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Zfp638-201ENSMUST00000032088 6199 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Gm25760-201ENSMUST00000103989 132 ntBASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Gm14864-201ENSMUST00000116164 1087 ntBASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Gm16057-201ENSMUST00000120811 759 ntBASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Gm14489-201ENSMUST00000120868 901 ntBASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Gm14380-201ENSMUST00000122298 431 ntBASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Gm12778-201ENSMUST00000122341 333 ntBASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Gm7426-201ENSMUST00000179046 404 ntBASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Gm8245-201ENSMUST00000182434 987 ntBASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 AC154323.2-201ENSMUST00000226557 1151 ntBASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cacna1fQ9JIS7 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms