Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm4374-201ENSMUST00000204929 424 ntBASIC8.46□□□□□ -1.06
Clp1Q99LI9 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Clp1Q99LI9 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC8.46□□□□□ -1.06
Clp1Q99LI9 Gm20948-201ENSMUST00000211091 449 ntBASIC8.46□□□□□ -1.06
Clp1Q99LI9 AC153561.1-201ENSMUST00000215943 469 ntBASIC8.46□□□□□ -1.06
Clp1Q99LI9 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC8.46□□□□□ -1.06
Clp1Q99LI9 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC8.46□□□□□ -1.06
Clp1Q99LI9 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC8.46□□□□□ -1.06
Clp1Q99LI9 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC8.46□□□□□ -1.06
Clp1Q99LI9 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC8.46□□□□□ -1.06
Clp1Q99LI9 AC107663.3-201ENSMUST00000225873 601 ntBASIC8.46□□□□□ -1.06
Clp1Q99LI9 Cthrc1-204ENSMUST00000226433 596 ntBASIC8.46□□□□□ -1.06
Clp1Q99LI9 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Clp1Q99LI9 Gm20900-201ENSMUST00000078729 472 ntBASIC8.46□□□□□ -1.06
Clp1Q99LI9 Gm2a-201ENSMUST00000000608 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Clp1Q99LI9 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Clp1Q99LI9 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Clp1Q99LI9 Tifab-202ENSMUST00000225063 2718 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Clp1Q99LI9 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC8.46□□□□□ -1.06
Clp1Q99LI9 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Clp1Q99LI9 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.06
Clp1Q99LI9 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Clp1Q99LI9 Gm31983-202ENSMUST00000210553 3155 ntTSL 5 BASIC8.46□□□□□ -1.06
Clp1Q99LI9 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Clp1Q99LI9 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Clp1Q99LI9 Parp9-202ENSMUST00000114877 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Clp1Q99LI9 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Clp1Q99LI9 D5Ertd615e-202ENSMUST00000197016 3911 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Clp1Q99LI9 Golga1-201ENSMUST00000039165 4869 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Clp1Q99LI9 Drp2-206ENSMUST00000153424 7135 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Clp1Q99LI9 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC8.46□□□□□ -1.06
Clp1Q99LI9 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Olfr1124-202ENSMUST00000215909 2422 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm26802-201ENSMUST00000181066 2144 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 Atxn1-202ENSMUST00000167708 3751 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Olfr806-203ENSMUST00000215142 3108 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm37673-201ENSMUST00000194880 2451 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 AC122397.1-201ENSMUST00000228650 2819 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 Lrrc32-201ENSMUST00000165205 3817 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 AC122426.1-201ENSMUST00000214736 2235 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 Tyrp1-202ENSMUST00000102831 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Kcnip4-204ENSMUST00000166924 2257 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 AC124680.1-201ENSMUST00000223923 1585 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 Dclre1b-202ENSMUST00000063502 4113 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm3455-201ENSMUST00000204812 1954 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm13750-201ENSMUST00000117621 465 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm14900-201ENSMUST00000120304 733 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm24530-201ENSMUST00000157948 288 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm27458-201ENSMUST00000185108 121 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm29145-201ENSMUST00000189914 456 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm9931-201ENSMUST00000193584 1185 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm8891-201ENSMUST00000198546 832 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm2767-201ENSMUST00000209582 473 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm19007-201ENSMUST00000217746 874 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm6841-201ENSMUST00000220602 598 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 CT485612.3-201ENSMUST00000222179 408 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm9280-201ENSMUST00000223155 517 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm5087-204ENSMUST00000225820 645 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm25005-201ENSMUST00000083812 156 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Prg4-202ENSMUST00000111901 3495 ntTSL 5 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Atp2a1-201ENSMUST00000032974 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Lin54-202ENSMUST00000123572 4592 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Olfr237-ps1-202ENSMUST00000215911 4220 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Aoc1-203ENSMUST00000162948 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Gm42930-201ENSMUST00000200872 3260 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 Plat-201ENSMUST00000033941 2525 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Adgrf4-203ENSMUST00000167993 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Vps8-201ENSMUST00000096191 4952 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Rtl5-201ENSMUST00000113631 4653 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Clp1Q99LI9 AC149294.7-201ENSMUST00000227475 1432 ntBASIC8.45□□□□□ -1.06
Clp1Q99LI9 Rpgr-205ENSMUST00000115533 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Clp1Q99LI9 AC158981.2-201ENSMUST00000227565 1537 ntBASIC8.44□□□□□ -1.06
Clp1Q99LI9 Tmem63c-202ENSMUST00000131878 3311 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Wdr48-205ENSMUST00000215307 3776 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Clp1Q99LI9 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms