Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm12599-201ENSMUST00000120534 792 ntBASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gm4887-201ENSMUST00000122230 1053 ntBASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Mir1962-201ENSMUST00000157516 121 ntBASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gm22687-201ENSMUST00000158301 105 ntBASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gm22262-201ENSMUST00000158713 86 ntBASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gm17046-201ENSMUST00000168078 850 ntBASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gm2951-201ENSMUST00000169447 490 ntBASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gm18033-201ENSMUST00000186678 550 ntBASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gm23604-202ENSMUST00000198428 137 ntBASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gm18765-201ENSMUST00000203166 660 ntBASIC7.13□□□□□ -1.27
Cstf3Q99LI7 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cstf3Q99LI7 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm37426-201ENSMUST00000195241 2470 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm13301-201ENSMUST00000121728 2446 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm45528-201ENSMUST00000209854 3145 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm43398-201ENSMUST00000196584 2742 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm38244-201ENSMUST00000191737 2586 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm12075-201ENSMUST00000117426 397 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm15576-201ENSMUST00000117806 583 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm12361-201ENSMUST00000119806 1044 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm11945-201ENSMUST00000120551 476 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm5270-201ENSMUST00000121506 1002 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm26238-201ENSMUST00000175538 117 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm7891-201ENSMUST00000190284 843 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm17965-201ENSMUST00000193904 517 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm45359-201ENSMUST00000210635 427 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 AC154382.1-201ENSMUST00000220958 1282 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm18619-201ENSMUST00000222722 1147 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 AC140208.1-201ENSMUST00000226609 285 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gpr87-201ENSMUST00000056898 1080 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Olfr890-201ENSMUST00000079804 945 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm43581-201ENSMUST00000196766 2864 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Gm37984-201ENSMUST00000191641 3733 ntBASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cstf3Q99LI7 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms