Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm37017-201ENSMUST00000195266 747 ntBASIC8.81□□□□□ -1
Atg4aQ8C9S8 Gm43656-201ENSMUST00000197882 434 ntBASIC8.81□□□□□ -1
Atg4aQ8C9S8 Gm42938-201ENSMUST00000198414 1072 ntBASIC8.81□□□□□ -1
Atg4aQ8C9S8 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC8.81□□□□□ -1
Atg4aQ8C9S8 AC151901.1-201ENSMUST00000218274 180 ntBASIC8.81□□□□□ -1
Atg4aQ8C9S8 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Gm19011-201ENSMUST00000221777 808 ntBASIC8.81□□□□□ -1
Atg4aQ8C9S8 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Atg4aQ8C9S8 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.8□□□□□ -1
Atg4aQ8C9S8 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC8.8□□□□□ -1
Atg4aQ8C9S8 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gm44121-201ENSMUST00000205169 2006 ntBASIC8.8□□□□□ -1
Atg4aQ8C9S8 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gm12754-201ENSMUST00000121908 454 ntBASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gm26480-201ENSMUST00000122619 297 ntBASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gm10913-201ENSMUST00000133732 463 ntBASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gm16026-205ENSMUST00000162923 641 ntBASIC8.8□□□□□ -1
Atg4aQ8C9S8 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gm21182-201ENSMUST00000178899 794 ntBASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Mir7084-201ENSMUST00000183876 70 ntBASIC8.8□□□□□ -1
Atg4aQ8C9S8 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gm44258-201ENSMUST00000204925 301 ntBASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gm44943-201ENSMUST00000207254 300 ntBASIC8.8□□□□□ -1
Atg4aQ8C9S8 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC8.8□□□□□ -1
Atg4aQ8C9S8 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.8□□□□□ -1
Atg4aQ8C9S8 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC8.8□□□□□ -1
Atg4aQ8C9S8 AC138604.2-201ENSMUST00000226620 921 ntBASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
Atg4aQ8C9S8 AC132412.1-201ENSMUST00000204155 2724 ntBASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.8□□□□□ -1
Atg4aQ8C9S8 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Atg4aQ8C9S8 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC8.79□□□□□ -1
Atg4aQ8C9S8 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Atg4aQ8C9S8 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Atg4aQ8C9S8 AC171003.1-201ENSMUST00000221667 1665 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Atg4aQ8C9S8 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Gm18830-201ENSMUST00000199036 1396 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Gm17170-201ENSMUST00000112785 316 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Gm14279-201ENSMUST00000117142 332 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Gm10243-201ENSMUST00000117571 333 ntBASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 137 ms